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The map label for this gene is yrkF [H]

Identifier: 134302118

GI number: 134302118

Start: 1098615

End: 1099373

Strand: Direct

Name: yrkF [H]

Synonym: FTW_1160

Alternate gene names: 134302118

Gene position: 1098615-1099373 (Clockwise)

Preceding gene: 134302117

Following gene: 134302119

Centisome position: 57.87

GC content: 33.6

Gene sequence:

>759_bases
GTGAAAATTATGCAACACTCATCAGGTTTTTTAAAATTAGTAGATGACGCAAAATCTAGAATACAAGAATGTAGCGTTGA
TGATATTCAAAAAATGAATGAAACACAAACACTTGATGGTTTACTTATAGACACTCGCGAAGAGTCAGAAGTAGCTAATG
GATATATTCCAAATGCTATTCATCTAAGTAAAGGAATTATTGAGAGCGCTATTGAATCAGCTGTTCCTAACAAAAACCAA
AAAATGTATTTTTATTGTGGTGGTGGCTTTAGATCTGCTTTAGTAGCAGATAAGCTTCGCGAGATGGGTTATAAAAATGT
TATTTCTGTTGATGGTGGATGGAGAGCATGGAATGCTAAAGGTTACCCTACAGTCTCACCTAATCAGTTCAGACCGAATG
AATTTTTAAAACTTGTCAATAATGCGAAAACCCAAATAAAAGAATGCTCTACAACTGAACTATACAATAAGATTAATTCT
CAAGAACTTGATGGTATAGTTTTTGATGTTAGAGAAGACTCTGAATTTAACAGATTCCACATTCAAGGAGCTACACATCT
AAGTAAAGGACAAATTGAAGTAAAAATTGAAAACTTAGTACCTAACAAACAACAAAAAATATACTTATATTGTGGCAGTG
GTTTTCGCTCAGCTTTAGCAGCAGAAAGCTTACAGCATATGGGTTATACAAACGTAGTTTCTATAGCTGGTGGAATCAAG
GATTGGCTAGCTAATAACTATCCAGTTTCTCAAAATTAA

Upstream 100 bases:

>100_bases
TAATTATCTTTCAGATTGTAGATTATATCCTTTAATTATTCTCTTTAAGCAGATAAAAATATAAAATACTTAATAGTTAA
ACAACCAAAAAAATTATAAG

Downstream 100 bases:

>100_bases
GGATAAAGAATAATGTCATTTCGTATAGGTCATGGTTATGATGTGCATAAGTTCACTTCAGCAAAGCAAAATATCATTAT
TGGTGGAGTCGAAATTGCTT

Product: rhodanese-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKIMQHSSGFLKLVDDAKSRIQECSVDDIQKMNETQTLDGLLIDTREESEVANGYIPNAIHLSKGIIESAIESAVPNKNQ
KMYFYCGGGFRSALVADKLREMGYKNVISVDGGWRAWNAKGYPTVSPNQFRPNEFLKLVNNAKTQIKECSTTELYNKINS
QELDGIVFDVREDSEFNRFHIQGATHLSKGQIEVKIENLVPNKQQKIYLYCGSGFRSALAAESLQHMGYTNVVSIAGGIK
DWLANNYPVSQN

Sequences:

>Translated_252_residues
MKIMQHSSGFLKLVDDAKSRIQECSVDDIQKMNETQTLDGLLIDTREESEVANGYIPNAIHLSKGIIESAIESAVPNKNQ
KMYFYCGGGFRSALVADKLREMGYKNVISVDGGWRAWNAKGYPTVSPNQFRPNEFLKLVNNAKTQIKECSTTELYNKINS
QELDGIVFDVREDSEFNRFHIQGATHLSKGQIEVKIENLVPNKQQKIYLYCGSGFRSALAAESLQHMGYTNVVSIAGGIK
DWLANNYPVSQN
>Mature_252_residues
MKIMQHSSGFLKLVDDAKSRIQECSVDDIQKMNETQTLDGLLIDTREESEVANGYIPNAIHLSKGIIESAIESAVPNKNQ
KMYFYCGGGFRSALVADKLREMGYKNVISVDGGWRAWNAKGYPTVSPNQFRPNEFLKLVNNAKTQIKECSTTELYNKINS
QELDGIVFDVREDSEFNRFHIQGATHLSKGQIEVKIENLVPNKQQKIYLYCGSGFRSALAAESLQHMGYTNVVSIAGGIK
DWLANNYPVSQN

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 28237; Mature: 28237

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMQHSSGFLKLVDDAKSRIQECSVDDIQKMNETQTLDGLLIDTREESEVANGYIPNAI
CCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHCCHHHHCCEEEECCCHHHHHCCCCCCHH
HLSKGIIESAIESAVPNKNQKMYFYCGGGFRSALVADKLREMGYKNVISVDGGWRAWNAK
HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCC
GYPTVSPNQFRPNEFLKLVNNAKTQIKECSTTELYNKINSQELDGIVFDVREDSEFNRFH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEECCCCCCCEEE
IQGATHLSKGQIEVKIENLVPNKQQKIYLYCGSGFRSALAAESLQHMGYTNVVSIAGGIK
ECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCHH
DWLANNYPVSQN
HHHCCCCCCCCC
>Mature Secondary Structure
MKIMQHSSGFLKLVDDAKSRIQECSVDDIQKMNETQTLDGLLIDTREESEVANGYIPNAI
CCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHCCHHHHCCEEEECCCHHHHHCCCCCCHH
HLSKGIIESAIESAVPNKNQKMYFYCGGGFRSALVADKLREMGYKNVISVDGGWRAWNAK
HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCC
GYPTVSPNQFRPNEFLKLVNNAKTQIKECSTTELYNKINSQELDGIVFDVREDSEFNRFH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEECCCCCCCEEE
IQGATHLSKGQIEVKIENLVPNKQQKIYLYCGSGFRSALAAESLQHMGYTNVVSIAGGIK
ECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCHH
DWLANNYPVSQN
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]