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The map label for this gene is ydiU [C]

Identifier: 134302092

GI number: 134302092

Start: 1073978

End: 1075372

Strand: Reverse

Name: ydiU [C]

Synonym: FTW_1132

Alternate gene names: 134302092

Gene position: 1075372-1073978 (Counterclockwise)

Preceding gene: 134302097

Following gene: 134302090

Centisome position: 56.64

GC content: 32.4

Gene sequence:

>1395_bases
ATGATTGATTTTCAATACACTTATAGTCAGTTATCAGAGCAATTCTACTCACGCCAAGCAGTATACAAATATCCTAATGC
AAAATTACTAATTTTAAATGATTGTTTAGTTACTGAATTAGGTCTGGATTTAGCCAATAAATCAGAACAGCAATTATTAG
AGTTTCTTTTGGGCTATAGCAGTAAAAAACCAATCTCACAAGCTTATGCTGGACATCAGTTTGGTAATTTTACAATGTTA
GGTGATGGACGTGCTATATTAATTGGCGAATATAAAAAGCCAAATGGGGAGTTAGTTGATTTTCATTTAAAAGGAGCGGG
CTTAACAAAGTTTTCACGTGGTGGAGATGGTAAAGCAGCTTTAGCGCCAATGCTCAGAGAATATATAGTTAGTGAAGCTA
TGTACAATCTAGGTATACCAACTAGTCGTATTTTAGCTGTTATAACCACGGGTGAAAATATTCAAAGAAACCAGCTAAAA
CAAGATGCTATAGCTGTTAGAGTTGCTAGTAGTCATATCCGTGTCGGGACATTTCAATATGCAGCAATGCTTGGTGAGAG
TTATAGCCAAGAATTATTAGATTATACAATCACAAGACATAATCTCCCCCATAATGATAATAAGACTTTGAGTCTACTTG
ATTATGTAATTGCTAAACAAACAAGCTTAATAACAGAGTGGGAGCGAGTTGGTTTTATTCATGGTGTGATGAATACAGAT
AATATGACTATCTCAGGTGAAACTATTGATTATGGTCCTTGTGCATTTATGGATAGTTATGATCCAGATACAGTTTTTAG
CTCAATAGATCGTCATGGTAGATATGCTTTTGCAAATCAAGCTTCAATCGCTGGATGGAATATAGCAAGGTTAGCAGAAA
GTTTATTGAAACTTATTTCAGCAGATGAGGAAGAGGCGATTAAATTAGCTCAAGATAAATTGCAAAGTTATTCAGAAACT
TATAAAAATAAATGGCAAAAAATGTTTCTTGCTAAGCTAGGACTTAGTATTAATAAAGCACATAATGATGAAATGATTTC
AGACTTACTTATAGAAATGTTTAAATTTAAGCTAGATTATACCAACACATTTTACAATCTAACATATAAAAACTTTGGAG
CATTAAAAGATTGTGGTTTAGGAGAATGGTTAGAAAAATATATAACCAAAAATGAGATAAATTTTGCAAATATGAAGAAG
ATAAATCCTGTAATTATTCCTCGTAATCATCAGGTAGAAAAAGCACTTAAGTCTGCCGAAGATACTAAGTTTGGCAATTT
ATATAACCTTGTAGCAGCTCTTAAAACACCTTATGAATTTAATATTCTAACTGAAAAGTATATAACAGAACCAGTTGAGG
AAGAAAAGGTTAGATTTACTTTTTGTGGGACTTAA

Upstream 100 bases:

>100_bases
TCCTTTTACTAGCTTTATATTATCTATTTTAACCTAAAAGCTATGTTATTAGCTATATTTTGTTAAAATTATACTAATTT
AGTAAAGTTTATGGTTTATT

Downstream 100 bases:

>100_bases
ACTGAAATATATAAAGCAATATTTAATCAATCTAAGAAGCTTTAGTAGTTTTATCAACAATAATAGCTGTAGTCATAGTA
CCATGAATGTTAAGAGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYSSKKPISQAYAGHQFGNFTML
GDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAALAPMLREYIVSEAMYNLGIPTSRILAVITTGENIQRNQLK
QDAIAVRVASSHIRVGTFQYAAMLGESYSQELLDYTITRHNLPHNDNKTLSLLDYVIAKQTSLITEWERVGFIHGVMNTD
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLISADEEEAIKLAQDKLQSYSET
YKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDYTNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKK
INPVIIPRNHQVEKALKSAEDTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKVRFTFCGT

Sequences:

>Translated_464_residues
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYSSKKPISQAYAGHQFGNFTML
GDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAALAPMLREYIVSEAMYNLGIPTSRILAVITTGENIQRNQLK
QDAIAVRVASSHIRVGTFQYAAMLGESYSQELLDYTITRHNLPHNDNKTLSLLDYVIAKQTSLITEWERVGFIHGVMNTD
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLISADEEEAIKLAQDKLQSYSET
YKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDYTNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKK
INPVIIPRNHQVEKALKSAEDTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKVRFTFCGT
>Mature_464_residues
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYSSKKPISQAYAGHQFGNFTML
GDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAALAPMLREYIVSEAMYNLGIPTSRILAVITTGENIQRNQLK
QDAIAVRVASSHIRVGTFQYAAMLGESYSQELLDYTITRHNLPHNDNKTLSLLDYVIAKQTSLITEWERVGFIHGVMNTD
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLISADEEEAIKLAQDKLQSYSET
YKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDYTNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKK
INPVIIPRNHQVEKALKSAEDTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKVRFTFCGT

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=374, Percent_Identity=35.5614973262032, Blast_Score=214, Evalue=1e-55,
Organism=Escherichia coli, GI1787999, Length=422, Percent_Identity=35.3080568720379, Blast_Score=263, Evalue=1e-71,
Organism=Saccharomyces cerevisiae, GI6325034, Length=351, Percent_Identity=33.3333333333333, Blast_Score=160, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 52655; Mature: 52655

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYS
CCCCCHHHHHHHHHHHCCCHHEECCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHCCC
SKKPISQAYAGHQFGNFTMLGDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAA
CCCCHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHH
LAPMLREYIVSEAMYNLGIPTSRILAVITTGENIQRNQLKQDAIAVRVASSHIRVGTFQY
HHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCHHHHHHHHHHEEEEECCCEEEHHHHH
AAMLGESYSQELLDYTITRHNLPHNDNKTLSLLDYVIAKQTSLITEWERVGFIHGVMNTD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLIS
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHC
ADEEEAIKLAQDKLQSYSETYKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCC
TNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKKINPVIIPRNHQVEKALKSAE
CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCC
DTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKVRFTFCGT
CCCCCHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCEEEEEECC
>Mature Secondary Structure
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYS
CCCCCHHHHHHHHHHHCCCHHEECCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHCCC
SKKPISQAYAGHQFGNFTMLGDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAA
CCCCHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHH
LAPMLREYIVSEAMYNLGIPTSRILAVITTGENIQRNQLKQDAIAVRVASSHIRVGTFQY
HHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCHHHHHHHHHHEEEEECCCEEEHHHHH
AAMLGESYSQELLDYTITRHNLPHNDNKTLSLLDYVIAKQTSLITEWERVGFIHGVMNTD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLIS
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHC
ADEEEAIKLAQDKLQSYSETYKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCC
TNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKKINPVIIPRNHQVEKALKSAE
CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCC
DTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKVRFTFCGT
CCCCCHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA