Click here to switch to the map view.

The map label for this gene is yrrM [H]

Identifier: 134302073

GI number: 134302073

Start: 1050772

End: 1051407

Strand: Reverse

Name: yrrM [H]

Synonym: FTW_1109

Alternate gene names: 134302073

Gene position: 1051407-1050772 (Counterclockwise)

Preceding gene: 134302080

Following gene: 134302072

Centisome position: 55.38

GC content: 35.69

Gene sequence:

>636_bases
ATGAGGCAAAATCAATTTACACAAGATGATATTTGGCAGTACTGTCTTGAGCATACTAGTGATTTATCAGACAATCTCAA
ACAGCTAAGCGAATACACACGTGAAAATATTCACGGTGCACAAATGCTTTCAGAGAAGATGGTTACTAAATTGTTACAAT
TTTTTGTTTTTGCTACTAGGGCAAGAGTATGTGTTGATGTTGGGACATTTACAGCTATGTCAGCGATTGCAATGGCTGAG
GCTGCCCCAGATACCAAAGTTTATACCATAGATAGAACTAATCAAGTAGGTGAGCAGCTAGCAAAAGAGTTTATTGCTAA
ATATCCCAATATTGAATATTGCCAAGGTAACGCTATGGATATCTTACCAACTTTATCAAATCAAATAGATATTGCTTTTA
TCGATGCGGATAAAAAACAGACACAAGAATATTTTGACATTTTAATCACCAAATTAGCGGATACTGGTGTAATTATAGTT
GATGACATTCTCTGGCGTGGTGAGGTTTTAGATCCTCGTGACAAACGCGCTAAAGCCTTAGACGATTTTAACAAATATGT
AAATCAACGCAATGACCTAGAAACATTAGTCTTACCTATTCGTCATGGTATCAACATCATAAGAAAAAGAACTTAG

Upstream 100 bases:

>100_bases
AAATTCTACCACAAAATTTAACTAAAAGCACTCTTAGCGTCTAGACTAATTTAATTGATTAATGCAAAATACACAGAGCT
TTTTAAACATATTAATTTCG

Downstream 100 bases:

>100_bases
AAACATCAATGAGACAAATAATATTAATCTTTGTGATTGCTATGCAGTTTTGTTTTGTCACTGCTTATGCAGCTACGTGT
AATAGTGTAAATATCGATGG

Product: o-methyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRQNQFTQDDIWQYCLEHTSDLSDNLKQLSEYTRENIHGAQMLSEKMVTKLLQFFVFATRARVCVDVGTFTAMSAIAMAE
AAPDTKVYTIDRTNQVGEQLAKEFIAKYPNIEYCQGNAMDILPTLSNQIDIAFIDADKKQTQEYFDILITKLADTGVIIV
DDILWRGEVLDPRDKRAKALDDFNKYVNQRNDLETLVLPIRHGINIIRKRT

Sequences:

>Translated_211_residues
MRQNQFTQDDIWQYCLEHTSDLSDNLKQLSEYTRENIHGAQMLSEKMVTKLLQFFVFATRARVCVDVGTFTAMSAIAMAE
AAPDTKVYTIDRTNQVGEQLAKEFIAKYPNIEYCQGNAMDILPTLSNQIDIAFIDADKKQTQEYFDILITKLADTGVIIV
DDILWRGEVLDPRDKRAKALDDFNKYVNQRNDLETLVLPIRHGINIIRKRT
>Mature_211_residues
MRQNQFTQDDIWQYCLEHTSDLSDNLKQLSEYTRENIHGAQMLSEKMVTKLLQFFVFATRARVCVDVGTFTAMSAIAMAE
AAPDTKVYTIDRTNQVGEQLAKEFIAKYPNIEYCQGNAMDILPTLSNQIDIAFIDADKKQTQEYFDILITKLADTGVIIV
DDILWRGEVLDPRDKRAKALDDFNKYVNQRNDLETLVLPIRHGINIIRKRT

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Homo sapiens, GI31542747, Length=207, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI72001127, Length=176, Percent_Identity=36.9318181818182, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17565612, Length=217, Percent_Identity=31.3364055299539, Blast_Score=92, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25148771, Length=215, Percent_Identity=31.1627906976744, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI72001028, Length=211, Percent_Identity=29.8578199052133, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 24287; Mature: 24287

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQNQFTQDDIWQYCLEHTSDLSDNLKQLSEYTRENIHGAQMLSEKMVTKLLQFFVFATR
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARVCVDVGTFTAMSAIAMAEAAPDTKVYTIDRTNQVGEQLAKEFIAKYPNIEYCQGNAMD
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEECCCCCCC
ILPTLSNQIDIAFIDADKKQTQEYFDILITKLADTGVIIVDDILWRGEVLDPRDKRAKAL
HHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCHHHHHHHH
DDFNKYVNQRNDLETLVLPIRHGINIIRKRT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQNQFTQDDIWQYCLEHTSDLSDNLKQLSEYTRENIHGAQMLSEKMVTKLLQFFVFATR
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARVCVDVGTFTAMSAIAMAEAAPDTKVYTIDRTNQVGEQLAKEFIAKYPNIEYCQGNAMD
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEECCCCCCC
ILPTLSNQIDIAFIDADKKQTQEYFDILITKLADTGVIIVDDILWRGEVLDPRDKRAKAL
HHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCHHHHHHHH
DDFNKYVNQRNDLETLVLPIRHGINIIRKRT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]