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The map label for this gene is elbB [H]

Identifier: 134302042

GI number: 134302042

Start: 1015245

End: 1015904

Strand: Reverse

Name: elbB [H]

Synonym: FTW_1074

Alternate gene names: 134302042

Gene position: 1015904-1015245 (Counterclockwise)

Preceding gene: 134302043

Following gene: 134302041

Centisome position: 53.51

GC content: 36.21

Gene sequence:

>660_bases
ATGGCAAAAGTAGCGGTAGTATTATCTGGATGTGGTTATCTCGATGGTTCAGAAATACACGAAACTGTATTGACAATATT
AGCATTAGAGAAACAAGGAGTAGAGTGGCAAGGTGTTGCGCTAAATAGAGATCAAAAGCAGGTGATTAATCATTTGCACC
AATCTGTAGATAGCAAAGCATCACCGCGTAATATTCTTGAAGAATCAGCACGCATTACTAGAGGTAATGTCATTGATATA
GCTGATGCAGATAGTGATGATTATGATGCGATAATCTTTCCAGGTGGTTTTGGAGCAGCTAAAAATATTATGGATTTTGC
TTTTGTTGGCAATGATAGTTATCAAATGGATGAAGAAGTTCTAAAATTTGCTCGAGCTTTTTATTTAGCTGATAAACCCG
CTGGTTATATATGTATAGCACCGTTGATGATACCGTTGGTATATCCAGAGGGCACAAAAGCTACTGTTGGTACAGATGAA
AATACCACAGCTATATTAGCAAAAAAAGGTGCTGAAGCTATAATTATGGATGCTACAGATATTTGTGTTGATGAGAGTGT
CAAAATCGTATCAACACCAGCATATATGTGTGCAAGAAATATCTTAGAGGCAGCTCAAGGGATTGAAAAATTAGTAGAAA
AAGTAGTTAGTTATATTTAG

Upstream 100 bases:

>100_bases
CATCAGGGCCTATGGTAAGATCAAGCTATAGAGCTGATAGAGTTTTCAAAAGGAATAATTTAGATTTGTAAAATCAAAAA
ATATGTAAAGGTGAATAAAA

Downstream 100 bases:

>100_bases
ACAAAAGGTGTAAAAATGGCAGGTCATAGTAAATGGGCTAATATTAAGCATAAAAAAGCAAAAGAAGATGCAAAACGTGG
CAAAATCTTCACAAAGCTAA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKASPRNILEESARITRGNVIDI
ADADSDDYDAIIFPGGFGAAKNIMDFAFVGNDSYQMDEEVLKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDE
NTTAILAKKGAEAIIMDATDICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI

Sequences:

>Translated_219_residues
MAKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKASPRNILEESARITRGNVIDI
ADADSDDYDAIIFPGGFGAAKNIMDFAFVGNDSYQMDEEVLKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDE
NTTAILAKKGAEAIIMDATDICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI
>Mature_218_residues
AKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKASPRNILEESARITRGNVIDIA
DADSDDYDAIIFPGGFGAAKNIMDFAFVGNDSYQMDEEVLKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDEN
TTAILAKKGAEAIIMDATDICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=224, Percent_Identity=38.8392857142857, Blast_Score=150, Evalue=6e-37,
Organism=Homo sapiens, GI296531408, Length=224, Percent_Identity=33.9285714285714, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI87082228, Length=216, Percent_Identity=48.1481481481481, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23691; Mature: 23560

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKA
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCC
SPRNILEESARITRGNVIDIADADSDDYDAIIFPGGFGAAKNIMDFAFVGNDSYQMDEEV
CHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHEEEEECCCCCHHHHHH
LKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDENTTAILAKKGAEAIIMDATD
HHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCEEEEECHH
ICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI
HHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AKVAVVLSGCGYLDGSEIHETVLTILALEKQGVEWQGVALNRDQKQVINHLHQSVDSKA
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCC
SPRNILEESARITRGNVIDIADADSDDYDAIIFPGGFGAAKNIMDFAFVGNDSYQMDEEV
CHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHEEEEECCCCCHHHHHH
LKFARAFYLADKPAGYICIAPLMIPLVYPEGTKATVGTDENTTAILAKKGAEAIIMDATD
HHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCCEEECCCCCCEEEEEECCCCEEEEECHH
ICVDESVKIVSTPAYMCARNILEAAQGIEKLVEKVVSYI
HHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]