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The map label for this gene is yebC [C]

Identifier: 134302041

GI number: 134302041

Start: 1014483

End: 1015229

Strand: Reverse

Name: yebC [C]

Synonym: FTW_1073

Alternate gene names: 134302041

Gene position: 1015229-1014483 (Counterclockwise)

Preceding gene: 134302042

Following gene: 134302040

Centisome position: 53.48

GC content: 37.62

Gene sequence:

>747_bases
ATGGCAGGTCATAGTAAATGGGCTAATATTAAGCATAAAAAAGCAAAAGAAGATGCAAAACGTGGCAAAATCTTCACAAA
GCTAATTAGAGAAATAACTGTTGCTGCAAGATTAGGCGGTGGTGATAAAGATGCTAACCCGCGCTTAAGAGCTGCAATTG
CAACTGCACTAGCAAACAATATGAGTAAAGATACTATCGAAAGAGCCGTAGTAAAAGGTGCTGGTGGTGATGAAAGTGCA
AATGTAGAAGAAGTTCGCTACGAAGGTTATGGTCCTGGTGGTGTAGCAATTATTGTTGACTGTATGACGGATAATCGTAA
TCGTACTGTTGGTGAAGTTCGTCATACATTCACAAAAAGTGGTGGTAATCTTGGTACAGATGGTTCGGTTGCATATATGT
TCACTAAAAGAGGAATTATCTCATTTGCACCAGGTGTAGATGAGGATGCATTGATGGAAGTTGCTTTAGAAGCTGGTGCA
GAAGATATAATCACTCATGAAGATGGCAGTATAGATGTATACACAGATCCGCATGATTTTTCTGATATACAAGAGGTCTT
AATCGAAAAAGGCTTTAATTCTGAAAATGCAGAAGTTACTTTTGATGCTGAGACAAAAGCAGAATTAGATACAGAAACTG
CAGAGAAAGTTATGGCACTTATTGATAAGTTAGAAGATCTGGATGATGTACAAAGTGTTTATTCAAATGCTAACTTTACT
CAAGAGTTAATTGAGCAAATCGGTTAG

Upstream 100 bases:

>100_bases
ACCAGCATATATGTGTGCAAGAAATATCTTAGAGGCAGCTCAAGGGATTGAAAAATTAGTAGAAAAAGTAGTTAGTTATA
TTTAGACAAAAGGTGTAAAA

Downstream 100 bases:

>100_bases
AATTTCATATTTGACTATCAGTGTTGATGGTTTTCTATATATTGGTGTTAATCTATAGTAAAATCTTGTAGTCATAGGGT
TATAACAAAGTATTATATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGGDKDANPRLRAAIATALANNMSKDTIERAVVKGAGGDESA
NVEEVRYEGYGPGGVAIIVDCMTDNRNRTVGEVRHTFTKSGGNLGTDGSVAYMFTKRGIISFAPGVDEDALMEVALEAGA
EDIITHEDGSIDVYTDPHDFSDIQEVLIEKGFNSENAEVTFDAETKAELDTETAEKVMALIDKLEDLDDVQSVYSNANFT
QELIEQIG

Sequences:

>Translated_248_residues
MAGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGGDKDANPRLRAAIATALANNMSKDTIERAVVKGAGGDESA
NVEEVRYEGYGPGGVAIIVDCMTDNRNRTVGEVRHTFTKSGGNLGTDGSVAYMFTKRGIISFAPGVDEDALMEVALEAGA
EDIITHEDGSIDVYTDPHDFSDIQEVLIEKGFNSENAEVTFDAETKAELDTETAEKVMALIDKLEDLDDVQSVYSNANFT
QELIEQIG
>Mature_247_residues
AGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGGDKDANPRLRAAIATALANNMSKDTIERAVVKGAGGDESAN
VEEVRYEGYGPGGVAIIVDCMTDNRNRTVGEVRHTFTKSGGNLGTDGSVAYMFTKRGIISFAPGVDEDALMEVALEAGAE
DIITHEDGSIDVYTDPHDFSDIQEVLIEKGFNSENAEVTFDAETKAELDTETAEKVMALIDKLEDLDDVQSVYSNANFTQ
ELIEQIG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=245, Percent_Identity=28.1632653061224, Blast_Score=111, Evalue=7e-25,
Organism=Escherichia coli, GI1788171, Length=243, Percent_Identity=61.3168724279835, Blast_Score=325, Evalue=2e-90,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=40.5982905982906, Blast_Score=152, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=26.3374485596708, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=37.1212121212121, Blast_Score=154, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24583305, Length=247, Percent_Identity=29.9595141700405, Blast_Score=92, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26843; Mature: 26712

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGGDKDANPRLRAAIATALANN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
MSKDTIERAVVKGAGGDESANVEEVRYEGYGPGGVAIIVDCMTDNRNRTVGEVRHTFTKS
CCHHHHHHHHHHCCCCCCCCCHHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
GGNLGTDGSVAYMFTKRGIISFAPGVDEDALMEVALEAGAEDIITHEDGSIDVYTDPHDF
CCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHCCCHHHEECCCCCEEEEECCCCH
SDIQEVLIEKGFNSENAEVTFDAETKAELDTETAEKVMALIDKLEDLDDVQSVYSNANFT
HHHHHHHHHCCCCCCCCEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QELIEQIG
HHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKHKKAKEDAKRGKIFTKLIREITVAARLGGGDKDANPRLRAAIATALANN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
MSKDTIERAVVKGAGGDESANVEEVRYEGYGPGGVAIIVDCMTDNRNRTVGEVRHTFTKS
CCHHHHHHHHHHCCCCCCCCCHHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
GGNLGTDGSVAYMFTKRGIISFAPGVDEDALMEVALEAGAEDIITHEDGSIDVYTDPHDF
CCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHCCCHHHEECCCCCEEEEECCCCH
SDIQEVLIEKGFNSENAEVTFDAETKAELDTETAEKVMALIDKLEDLDDVQSVYSNANFT
HHHHHHHHHCCCCCCCCEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QELIEQIG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA