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The map label for this gene is ycjD [C]

Identifier: 134301997

GI number: 134301997

Start: 966722

End: 967108

Strand: Reverse

Name: ycjD [C]

Synonym: FTW_1018

Alternate gene names: 134301997

Gene position: 967108-966722 (Counterclockwise)

Preceding gene: 134301999

Following gene: 134301996

Centisome position: 50.94

GC content: 29.97

Gene sequence:

>387_bases
ATGAAAAGAATATTGCCATATAACCCAAAACTAAAAGATAGAGCTAAAGAACTTAGAAAAGCTGGTATTTTATCAGAAGT
TTTATTATGGCAAGAGTTAAAAAGTCGCAAGTTTTTAAACTTGGATTTTGATAGACAAAAAGTAATTGGTAACTATATTG
TAGATTTTTATTGTGATGATTTGCGGTTGGTGATAGAAATAGATGGCTCAAGCCATGATGATAAACAAGAATATGATAGT
ATTAGAGATTTATACTTATTAGGTTTGGATTTAAAAGTTTTACATATACAAGATATAGATGTAAAAAAGAACCTAGATGG
TGTGATGAGATATTTGGTAGATTATTGTGAAAAGTTGGGAGCTAATAACACGCCTCCCTCTGCATAG

Upstream 100 bases:

>100_bases
AAGTTTAGATAATTCCCCTTCGATTGGAAGGGGTGGCAGTCGTAGACTGACGGGGTAGTTTGACAAAGTATAAATATAAC
AAAACACTATAGTTTTAAAA

Downstream 100 bases:

>100_bases
CAGAGTACTCCTCTCAAGAGGAGAATTTTTTAAGGAGATATGAGTTTTGAAGATTACAAGACTAAAGATAAAAGGATATA
AGAATCTAGATATAGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKRILPYNPKLKDRAKELRKAGILSEVLLWQELKSRKFLNLDFDRQKVIGNYIVDFYCDDLRLVIEIDGSSHDDKQEYDS
IRDLYLLGLDLKVLHIQDIDVKKNLDGVMRYLVDYCEKLGANNTPPSA

Sequences:

>Translated_128_residues
MKRILPYNPKLKDRAKELRKAGILSEVLLWQELKSRKFLNLDFDRQKVIGNYIVDFYCDDLRLVIEIDGSSHDDKQEYDS
IRDLYLLGLDLKVLHIQDIDVKKNLDGVMRYLVDYCEKLGANNTPPSA
>Mature_128_residues
MKRILPYNPKLKDRAKELRKAGILSEVLLWQELKSRKFLNLDFDRQKVIGNYIVDFYCDDLRLVIEIDGSSHDDKQEYDS
IRDLYLLGLDLKVLHIQDIDVKKNLDGVMRYLVDYCEKLGANNTPPSA

Specific function: Unknown

COG id: COG2852

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjD and H.influenzae HI_0925 [H]

Homologues:

Organism=Escherichia coli, GI1787546, Length=100, Percent_Identity=38, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007569
- InterPro:   IPR011335 [H]

Pfam domain/function: PF04480 DUF559 [H]

EC number: NA

Molecular weight: Translated: 14974; Mature: 14974

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILPYNPKLKDRAKELRKAGILSEVLLWQELKSRKFLNLDFDRQKVIGNYIVDFYCDD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECC
LRLVIEIDGSSHDDKQEYDSIRDLYLLGLDLKVLHIQDIDVKKNLDGVMRYLVDYCEKLG
EEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
ANNTPPSA
CCCCCCCC
>Mature Secondary Structure
MKRILPYNPKLKDRAKELRKAGILSEVLLWQELKSRKFLNLDFDRQKVIGNYIVDFYCDD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECC
LRLVIEIDGSSHDDKQEYDSIRDLYLLGLDLKVLHIQDIDVKKNLDGVMRYLVDYCEKLG
EEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
ANNTPPSA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]