Click here to switch to the map view.

The map label for this gene is yqgE [C]

Identifier: 134301890

GI number: 134301890

Start: 856734

End: 857318

Strand: Direct

Name: yqgE [C]

Synonym: FTW_0891

Alternate gene names: 134301890

Gene position: 856734-857318 (Clockwise)

Preceding gene: 134301889

Following gene: 134301891

Centisome position: 45.13

GC content: 30.6

Gene sequence:

>585_bases
ATGTATCAAAATCATAAAAGTGAAATTTTATTAGCAACACCGCTTATAAAAGATGACATAGTATTTACTAAATCTGTAGT
TTATTTGTGTCAAAATGATCGACATGGAGCTATGGGTTTAATTATAAATAAACCTCTTGCAGACACTTTGAAAGATGTTT
TTGAGGAGTTACATATCCCTCATACTAATACTTTTAAAGAAATTTTAGAATACCCTCTTTACATGGGTGGTCCAATAAGC
CCGCATAAAATTATGATTTTACATACTACAAATGGGCGTAACTATACTTCAACGATAAAATTAGATGAAGGTTTAGCGAT
AACTGCTTCGATAGATATCTTAGAGGATATTGCCAATAATATTTTGCCTGAATATTTTCTACCAGTTGTTGGTTATAGCT
GCTGGACTGCAAATCAGCTTACAGATGAAATTAAATCAAATGACTGGATTGTAACAAATAAGCTTAATAAGAAAATCTTG
TTTAATCATGAAAATAAGGTAAAGTGGCAAAATCATCTAGAACATGCTGGCTATACTTTGCAAAGTCTTGACACATTATT
TAATAGAAATACAGGTAATTGCTAA

Upstream 100 bases:

>100_bases
ATATAGACTTTATCTTTATGTTCATCTAAAATTACCGCCACTGCGGCATTAATTTGTGCCATTTTTGTAAAAAAGTAAAT
TAGTACTAAGAAAATATAAT

Downstream 100 bases:

>100_bases
AATGTTTCAATCATTGATAGCTATTGATTATGGTAAAGCACGCATTGGTATAGCTAGTGGTCAAATGATTACTAAAACCG
CCACACCTATAGGCACTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIPHTNTFKEILEYPLYMGGPIS
PHKIMILHTTNGRNYTSTIKLDEGLAITASIDILEDIANNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVTNKLNKKIL
FNHENKVKWQNHLEHAGYTLQSLDTLFNRNTGNC

Sequences:

>Translated_194_residues
MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIPHTNTFKEILEYPLYMGGPIS
PHKIMILHTTNGRNYTSTIKLDEGLAITASIDILEDIANNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVTNKLNKKIL
FNHENKVKWQNHLEHAGYTLQSLDTLFNRNTGNC
>Mature_194_residues
MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIPHTNTFKEILEYPLYMGGPIS
PHKIMILHTTNGRNYTSTIKLDEGLAITASIDILEDIANNILPEYFLPVVGYSCWTANQLTDEIKSNDWIVTNKLNKKIL
FNHENKVKWQNHLEHAGYTLQSLDTLFNRNTGNC

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=182, Percent_Identity=32.4175824175824, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1193_FRATO (Q0BLI0)

Other databases:

- EMBL:   CP000437
- RefSeq:   YP_763691.1
- ProteinModelPortal:   Q0BLI0
- SMR:   Q0BLI0
- STRING:   Q0BLI0
- GeneID:   4306841
- GenomeReviews:   CP000437_GR
- KEGG:   fth:FTH_1193
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   GDKIFHN
- ProtClustDB:   CLSK934784
- BioCyc:   FTUL393011:FTH_1193-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 22197; Mature: 22197

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIP
CCCCCCCCEEEECCCCCCCHHHHHHEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCC
HTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLDEGLAITASIDILEDIANN
CCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEHHHHHHHHHHH
ILPEYFLPVVGYSCWTANQLTDEIKSNDWIVTNKLNKKILFNHENKVKWQNHLEHAGYTL
CCHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHCCHH
QSLDTLFNRNTGNC
HHHHHHHCCCCCCC
>Mature Secondary Structure
MYQNHKSEILLATPLIKDDIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEELHIP
CCCCCCCCEEEECCCCCCCHHHHHHEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCC
HTNTFKEILEYPLYMGGPISPHKIMILHTTNGRNYTSTIKLDEGLAITASIDILEDIANN
CCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEHHHHHHHHHHH
ILPEYFLPVVGYSCWTANQLTDEIKSNDWIVTNKLNKKILFNHENKVKWQNHLEHAGYTL
CCHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHCCHH
QSLDTLFNRNTGNC
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA