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The map label for this gene is sufD [C]

Identifier: 134301880

GI number: 134301880

Start: 845883

End: 847028

Strand: Direct

Name: sufD [C]

Synonym: FTW_0875

Alternate gene names: 134301880

Gene position: 845883-847028 (Clockwise)

Preceding gene: 134301879

Following gene: 134301881

Centisome position: 44.56

GC content: 29.23

Gene sequence:

>1146_bases
ATGTTAATAGATAATAAATCTCTGCCTACTACTAAACAAGAAAGCTGGAAGTATACAAATATTGCTTCTATTTATGAGAA
GAATAATATTAAAGAATTATTGATAGAGTCACCTAACTCAAAAGACTATCTTGAAGGCTTTAAGTTTGACACACAAGAGA
ATGTTGTGATAATTCTTGATGGCGTTTTAGCTATCGATTATAACAAAAAATTAAACCATATTAGTGCCTTAGAATTACAT
AAAGATGACAGAAATATGTCGAGGTTAGCTATAGAAAATTCTAAACATTTTGGTATCAATATAGCCAAAGATACTAAAGA
TTACTTAAGCCTAATCTTCATAAATACTGATATGGCAAAAGATAAATTAACAAATATATCTCTAAAGCTTGATGTTGATA
TGTTTGCTAGTCTAGATCTAGATATTGATTTTGTAAATCTTACTGAAAATTCTGCGATTAATTTATACTTTGATATAAAT
GTTGCTGAGGCTGCAAAAGTCAATTTTACAAATAATTCTAATAATCCAAATAATTCTAAGTTAATTACAACAGCAAACTA
TTTGATAAATTTAGATAGAGCTGCTGAGTTTAACGGTTTTAATCTTCTTAATAAAGATGCTTTATTAAGAAATGATTTTG
TAGTTAATCTCAACAAGCCTCATTCAAAGTTTGATGTTAGAGGACTATACTTAATAAATGATAGTGCTATTGCCAACACT
TGTTTTTTGGTTAATCATAATGCTTCGCATACTTATAGTAATGTCAACTTTCGCGGTGTTGCTAATGGTAATGCTAAGGC
TTGGTTTAATGCTAAAGCAATAGTTAATAAGGGTATTGAACAAATTCAAGCATATCAAAATAACAAAAATATTCAATTAA
GCAATAAAGCTGAAATAAATACTAAGCCGGAGCTAGAAATTTTTGCTGATGATGTTGTGTGTACTCATGGCGCAACGATA
GGGCAATTAGATAAAGACGCACTATTTTATTTACAATCTAGGGGATTAGAACTTCATGATGCTCAGCACTTACTATTAGA
AAGTTTTGTAAAATCTCAACTCACAAGTGATGATTTTCCTTTTGAAAATGAAATCAAAGAGGAGATAGTTGAGTCTTTGA
AGGATATTCTCCATAGTATCATTTAA

Upstream 100 bases:

>100_bases
TTTAGCAGATGGTAAAATAGTTAAGACTGGTGGAAAAGAGCTTGCTCTTGAATTAGAAGAGAAAGGTTATTCTTGGTTAA
ACAGCTAAAGGTTGCTAAAA

Downstream 100 bases:

>100_bases
TAGTTTTAATAAGCTATAATAAAATCTTATTTATTTTTCTTTTATATGGTAAATTAGAGCTATATTTAATCTAGTCTTTT
AAAATAATTTTATGAAAGAA

Product: sufB/SufD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDGVLAIDYNKKLNHISALELH
KDDRNMSRLAIENSKHFGINIAKDTKDYLSLIFINTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTENSAINLYFDIN
VAEAAKVNFTNNSNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLINDSAIANT
CFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIFADDVVCTHGATI
GQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEEIVESLKDILHSII

Sequences:

>Translated_381_residues
MLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDGVLAIDYNKKLNHISALELH
KDDRNMSRLAIENSKHFGINIAKDTKDYLSLIFINTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTENSAINLYFDIN
VAEAAKVNFTNNSNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLINDSAIANT
CFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIFADDVVCTHGATI
GQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEEIVESLKDILHSII
>Mature_381_residues
MLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILDGVLAIDYNKKLNHISALELH
KDDRNMSRLAIENSKHFGINIAKDTKDYLSLIFINTDMAKDKLTNISLKLDVDMFASLDLDIDFVNLTENSAINLYFDIN
VAEAAKVNFTNNSNNPNNSKLITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLINDSAIANT
CFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEINTKPELEIFADDVVCTHGATI
GQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFPFENEIKEEIVESLKDILHSII

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=368, Percent_Identity=24.4565217391304, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 43128; Mature: 43128

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILD
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEE
GVLAIDYNKKLNHISALELHKDDRNMSRLAIENSKHFGINIAKDTKDYLSLIFINTDMAK
CEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCC
DKLTNISLKLDVDMFASLDLDIDFVNLTENSAINLYFDINVAEAAKVNFTNNSNNPNNSK
HHHCEEEEEEEEEEEEEECCEEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCCCCE
LITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLINDSAIANT
EEEEEEEEEEECCCCCCCCCCEECCCCEEECCEEEEECCCCCCEEEEEEEEEECCCEEEE
CFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEIN
EEEEECCCCCEECCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
TKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFP
CCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCC
FENEIKEEIVESLKDILHSII
CHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLIDNKSLPTTKQESWKYTNIASIYEKNNIKELLIESPNSKDYLEGFKFDTQENVVIILD
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEE
GVLAIDYNKKLNHISALELHKDDRNMSRLAIENSKHFGINIAKDTKDYLSLIFINTDMAK
CEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCC
DKLTNISLKLDVDMFASLDLDIDFVNLTENSAINLYFDINVAEAAKVNFTNNSNNPNNSK
HHHCEEEEEEEEEEEEEECCEEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCCCCE
LITTANYLINLDRAAEFNGFNLLNKDALLRNDFVVNLNKPHSKFDVRGLYLINDSAIANT
EEEEEEEEEEECCCCCCCCCCEECCCCEEECCEEEEECCCCCCEEEEEEEEEECCCEEEE
CFLVNHNASHTYSNVNFRGVANGNAKAWFNAKAIVNKGIEQIQAYQNNKNIQLSNKAEIN
EEEEECCCCCEECCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
TKPELEIFADDVVCTHGATIGQLDKDALFYLQSRGLELHDAQHLLLESFVKSQLTSDDFP
CCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCCCC
FENEIKEEIVESLKDILHSII
CHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]