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The map label for this gene is yfiO [C]

Identifier: 134301740

GI number: 134301740

Start: 679143

End: 679967

Strand: Direct

Name: yfiO [C]

Synonym: FTW_0700

Alternate gene names: 134301740

Gene position: 679143-679967 (Clockwise)

Preceding gene: 134301733

Following gene: 134301742

Centisome position: 35.77

GC content: 33.33

Gene sequence:

>825_bases
ATGAAAAGGTTTTTATATTTAATAATAATTACATTTATGTTATTGCTATTGAGTTCTTGTGGTCCTAAAAAGGATAGTGA
GCTACCACAAGTCTACACAGGTTATACCGCTAGCTTTATTTATGCTAAAGCTCATGAGCAAATGCAGAATCAAAAATATT
TTGATGCAATTAGATCGTATAAGTCATTGGTGGCACAGTATCCATTTACACCATTGGCAGAGAAGGGTATGGTTGATTTG
ATATATGTTTATTATATGGATGATGAGTCAACTATGGCGCTTGCATTAGGTCAACAGTTTATCAAGATGCATCCATATAG
TATATACAAAGGGTATGTTTACTACATGATAGGTGTTGTAGGCTTTGAGGATGGAAGGGGTATGTTACAAACTTATGCGC
CATATGATATGAACTATCATGATCCTACTGGATATCAAGATGCATATACTAATTTCGAAAAAGCTATTCAATTAGATCCT
ACTGGTAGTTTTGTTCCAGATGCTAAACGCAGAATGATATTCATAAATAATATTATCGCAAGGCACTATGATGATATCGC
TCATTTTTATTTTAAGAGAGGTGCTTATAATGCAGCTATTGATAGAGCTTCTCAAGTGATAAGAAATTATCCACAAAGTA
CATCAACAGAGGATGCTTTGGTCTTAACAATTAGAGCTTATAATAAGTTAGGCTTATATGATCAAGCTAAAGCAAATATT
CGTGTACTTAAGAAAAATTATCCTAAAAATAAATTTATTAAAAACCTTCGTCCGGATGGTACAGAAGAGCCAAGTTGGTA
TCAAAGATGGTTTGGCTGGTTATAG

Upstream 100 bases:

>100_bases
ATTATGTGCCATGTTTATATGCTTAATATAAATATTTTTATACAGAAAATATTAATTTTACATAGAATTATATAAGAAAA
TTCTAAGGATAGTTAATCAA

Downstream 100 bases:

>100_bases
ACCAACTTTTAGTTCAAAAACTTATTCTATATTAAGATTTAATAGCTTTTTTTTGAAGTATTAATCATTTAGTATGTTTG
TTATCATCGAATAATTTCTT

Product: lipoprotein

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKRFLYLIIITFMLLLLSSCGPKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDL
IYVYYMDDESTMALALGQQFIKMHPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDP
TGSFVPDAKRRMIFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKANI
RVLKKNYPKNKFIKNLRPDGTEEPSWYQRWFGWL

Sequences:

>Translated_274_residues
MKRFLYLIIITFMLLLLSSCGPKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDL
IYVYYMDDESTMALALGQQFIKMHPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDP
TGSFVPDAKRRMIFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKANI
RVLKKNYPKNKFIKNLRPDGTEEPSWYQRWFGWL
>Mature_274_residues
MKRFLYLIIITFMLLLLSSCGPKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIRSYKSLVAQYPFTPLAEKGMVDL
IYVYYMDDESTMALALGQQFIKMHPYSIYKGYVYYMIGVVGFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDP
TGSFVPDAKRRMIFINNIIARHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKANI
RVLKKNYPKNKFIKNLRPDGTEEPSWYQRWFGWL

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=246, Percent_Identity=29.2682926829268, Blast_Score=127, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32044; Mature: 32044

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLYLIIITFMLLLLSSCGPKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIRSY
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMHPYSIYKGYVYYMIGVV
HHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPTGSFVPDAKRRMIFINNIIA
EECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHH
RHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKANI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE
RVLKKNYPKNKFIKNLRPDGTEEPSWYQRWFGWL
EEEECCCCHHHHHHCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKRFLYLIIITFMLLLLSSCGPKKDSELPQVYTGYTASFIYAKAHEQMQNQKYFDAIRSY
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KSLVAQYPFTPLAEKGMVDLIYVYYMDDESTMALALGQQFIKMHPYSIYKGYVYYMIGVV
HHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GFEDGRGMLQTYAPYDMNYHDPTGYQDAYTNFEKAIQLDPTGSFVPDAKRRMIFINNIIA
EECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHH
RHYDDIAHFYFKRGAYNAAIDRASQVIRNYPQSTSTEDALVLTIRAYNKLGLYDQAKANI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE
RVLKKNYPKNKFIKNLRPDGTEEPSWYQRWFGWL
EEEECCCCHHHHHHCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8097014; 10984043 [H]