Click here to switch to the map view.

The map label for this gene is gbpA [H]

Identifier: 134301671

GI number: 134301671

Start: 603892

End: 605682

Strand: Reverse

Name: gbpA [H]

Synonym: FTW_0611

Alternate gene names: 134301671

Gene position: 605682-603892 (Counterclockwise)

Preceding gene: 134301681

Following gene: 134301668

Centisome position: 31.9

GC content: 35.12

Gene sequence:

>1791_bases
ATGAAATTAAACAAAATTACATTATTAACTGGCTTAGCGTTATTAGTCAGCTCAGAAGCATACTCACATGGTTATGTCGA
AAGTCCAGCTTCTCGTGCATTATTATGTAAAGAAGGCAAAAATAAAGACTGTGGCGAAAGAGCTCAATATGAGCCCCAAT
CAATAGAACAAGCAGATGAGTTATTTAATTTAGGAGCTCTAGATAATAATATAGGAAGTGCTGATGTAGCAGGCTTTGAA
TCACTTGATGAACAAGAGCAAAGTCGTTGGGCAAAAACTGTTGTTCAACCTGGACAACCACTAAAGATTAAGTGGCAATT
TACTGCAAACCATAAATCTAAGCATTTCAAATTTTATATTACTAAACCTAACTGGGATCCTAATAAACTACTTACTCGAG
AAAGTTTTGAAGAAAAGCCACTAAATTGTTATGATCCTCAGCCAACTTGGGTAGCTCCTAACCAACCGCCTAAAGATGGT
TTAACATTTACATGCACAATGCCAAATAGATCAGGTTATCAAATCATCATGGCAGAATGGGACGTTGATGATACTAGAAT
GAGTTTCTACAATTTGCTCGACTTAGACTTTACAACCAGTAAGCCAGCAGGCACTGTAATCCTATCTGACGGTTCAAGCA
GTAATAATAATGGTTCGCAACCATCTGCAACATCAACTTATGACCCTAGTAAATCATATCCAACACCTGGAACTGAAGTA
GTTTTTGATGGCAAAGTTTATCAAAACAAATGGTATGTTAATCCAGGTCAACAGCCAGGAGCTGAGCAATGGGGACCTTG
GGCATTTGTTAGAGACCATCAACAGCAAAACAATCCTTCTGATAAATTCCCTCTTGAGGCAACGAAATTTACAATAAACC
CACTAAACATTAAAGAAGGTGATAAGATCACACTACAAGTATTCAAAGATGGAACTATGACAGATTATCCATTACTTACA
GTACCTAAAGCAATAAGTACAAATGATTTGTTCTTAGAGCTTACTGAAAAAATTAATAAAATTAGTACTGAGCAGCTTAA
TAACCAGATTATTGCTGGTGTTAAAGATAGTAATAATGCTGTTATTCCTAATGGCAATGCTGTATATATTTACCAAACAG
CAGACAAACCATATGATCAGATTAGTTTTTACTATCATCAAGCTAACCAAAACTTAAAAAATGAGCTTCATTTGATGGAT
TTCAAAGACCAATATAATATTAGCTCAGATGGCAAGCTTTATATTAACGCAAAAATAATGTCTCATAGCTCTGCAACTGC
TAATGTAACAGTAGTTCTACAAGATCAAAATGGTAATCAAGTTTATAGAAAAACAGACATTCAGATCTCTCCTATGGATA
CATATGATCTAGCTTTAGCGATTGATAATATCAAAGCTGGAGACTATAAACTTATTATCTCAAGTGAACTTGCTGGAGCA
GAAGCTTGGCAGAAGGATATGAACATTAAAGCAGTAAGTTCAGAGACAAGTGATGATAATAATAATCCTCCGCCAGCAAA
CCAAGATATTAATGTTAACATAGAGTCAAACACACCTTACTATCAGGTTAATCCAAATGATTCTGTAACCGCTAGAGCAT
GGGCTAGTAGTCTTGGCAATATTAACTTAGCAAACAATCAAGTAACGATTATTGCTTGGAATAAAACTCTTCAAGCTAGT
GGCAATGATAGTTCTGCCTATGTAAAATGCCCACTTCCTAAAAATAATCAAACAAGTATAACATACTTGGTTAGCGGAGA
TTTAAATAACGTCAATTGCACTATCAAATAA

Upstream 100 bases:

>100_bases
TTACCAATTTGAATTATTAAATATAACTGATAGGATTAAACCTACAGATAGTTTATTTGCTAACTGTGTCTTTTAAACAA
TATAGATAAGGAGTCTTATC

Downstream 100 bases:

>100_bases
GGATCTCATATCCATATATGTTGAAATCATATTGAGCATATTTACACACATTATATTTCAATGCAATAATATCTAAAAAA
TCTATCTAATTGTTCAGTCT

Product: chitin binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MKLNKITLLTGLALLVSSEAYSHGYVESPASRALLCKEGKNKDCGERAQYEPQSIEQADELFNLGALDNNIGSADVAGFE
SLDEQEQSRWAKTVVQPGQPLKIKWQFTANHKSKHFKFYITKPNWDPNKLLTRESFEEKPLNCYDPQPTWVAPNQPPKDG
LTFTCTMPNRSGYQIIMAEWDVDDTRMSFYNLLDLDFTTSKPAGTVILSDGSSSNNNGSQPSATSTYDPSKSYPTPGTEV
VFDGKVYQNKWYVNPGQQPGAEQWGPWAFVRDHQQQNNPSDKFPLEATKFTINPLNIKEGDKITLQVFKDGTMTDYPLLT
VPKAISTNDLFLELTEKINKISTEQLNNQIIAGVKDSNNAVIPNGNAVYIYQTADKPYDQISFYYHQANQNLKNELHLMD
FKDQYNISSDGKLYINAKIMSHSSATANVTVVLQDQNGNQVYRKTDIQISPMDTYDLALAIDNIKAGDYKLIISSELAGA
EAWQKDMNIKAVSSETSDDNNNPPPANQDINVNIESNTPYYQVNPNDSVTARAWASSLGNINLANNQVTIIAWNKTLQAS
GNDSSAYVKCPLPKNNQTSITYLVSGDLNNVNCTIK

Sequences:

>Translated_596_residues
MKLNKITLLTGLALLVSSEAYSHGYVESPASRALLCKEGKNKDCGERAQYEPQSIEQADELFNLGALDNNIGSADVAGFE
SLDEQEQSRWAKTVVQPGQPLKIKWQFTANHKSKHFKFYITKPNWDPNKLLTRESFEEKPLNCYDPQPTWVAPNQPPKDG
LTFTCTMPNRSGYQIIMAEWDVDDTRMSFYNLLDLDFTTSKPAGTVILSDGSSSNNNGSQPSATSTYDPSKSYPTPGTEV
VFDGKVYQNKWYVNPGQQPGAEQWGPWAFVRDHQQQNNPSDKFPLEATKFTINPLNIKEGDKITLQVFKDGTMTDYPLLT
VPKAISTNDLFLELTEKINKISTEQLNNQIIAGVKDSNNAVIPNGNAVYIYQTADKPYDQISFYYHQANQNLKNELHLMD
FKDQYNISSDGKLYINAKIMSHSSATANVTVVLQDQNGNQVYRKTDIQISPMDTYDLALAIDNIKAGDYKLIISSELAGA
EAWQKDMNIKAVSSETSDDNNNPPPANQDINVNIESNTPYYQVNPNDSVTARAWASSLGNINLANNQVTIIAWNKTLQAS
GNDSSAYVKCPLPKNNQTSITYLVSGDLNNVNCTIK
>Mature_596_residues
MKLNKITLLTGLALLVSSEAYSHGYVESPASRALLCKEGKNKDCGERAQYEPQSIEQADELFNLGALDNNIGSADVAGFE
SLDEQEQSRWAKTVVQPGQPLKIKWQFTANHKSKHFKFYITKPNWDPNKLLTRESFEEKPLNCYDPQPTWVAPNQPPKDG
LTFTCTMPNRSGYQIIMAEWDVDDTRMSFYNLLDLDFTTSKPAGTVILSDGSSSNNNGSQPSATSTYDPSKSYPTPGTEV
VFDGKVYQNKWYVNPGQQPGAEQWGPWAFVRDHQQQNNPSDKFPLEATKFTINPLNIKEGDKITLQVFKDGTMTDYPLLT
VPKAISTNDLFLELTEKINKISTEQLNNQIIAGVKDSNNAVIPNGNAVYIYQTADKPYDQISFYYHQANQNLKNELHLMD
FKDQYNISSDGKLYINAKIMSHSSATANVTVVLQDQNGNQVYRKTDIQISPMDTYDLALAIDNIKAGDYKLIISSELAGA
EAWQKDMNIKAVSSETSDDNNNPPPANQDINVNIESNTPYYQVNPNDSVTARAWASSLGNINLANNQVTIIAWNKTLQAS
GNDSSAYVKCPLPKNNQTSITYLVSGDLNNVNCTIK

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 66408; Mature: 66408

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNKITLLTGLALLVSSEAYSHGYVESPASRALLCKEGKNKDCGERAQYEPQSIEQADE
CCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHH
LFNLGALDNNIGSADVAGFESLDEQEQSRWAKTVVQPGQPLKIKWQFTANHKSKHFKFYI
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEE
TKPNWDPNKLLTRESFEEKPLNCYDPQPTWVAPNQPPKDGLTFTCTMPNRSGYQIIMAEW
ECCCCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEEC
DVDDTRMSFYNLLDLDFTTSKPAGTVILSDGSSSNNNGSQPSATSTYDPSKSYPTPGTEV
CCCHHHHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VFDGKVYQNKWYVNPGQQPGAEQWGPWAFVRDHQQQNNPSDKFPLEATKFTINPLNIKEG
EECCEEECCEEEECCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCEEEEEEEEECCCCCC
DKITLQVFKDGTMTDYPLLTVPKAISTNDLFLELTEKINKISTEQLNNQIIAGVKDSNNA
CEEEEEEEECCCCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEEECCCCE
VIPNGNAVYIYQTADKPYDQISFYYHQANQNLKNELHLMDFKDQYNISSDGKLYINAKIM
ECCCCCEEEEEECCCCCCHHEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEE
SHSSATANVTVVLQDQNGNQVYRKTDIQISPMDTYDLALAIDNIKAGDYKLIISSELAGA
ECCCCCEEEEEEEECCCCCEEEEEECCEECCCCCEEEEEEEECCCCCCEEEEEECCCCCC
EAWQKDMNIKAVSSETSDDNNNPPPANQDINVNIESNTPYYQVNPNDSVTARAWASSLGN
HHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEHHHHHHHCCC
INLANNQVTIIAWNKTLQASGNDSSAYVKCPLPKNNQTSITYLVSGDLNNVNCTIK
EEECCCEEEEEEECCEEECCCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEC
>Mature Secondary Structure
MKLNKITLLTGLALLVSSEAYSHGYVESPASRALLCKEGKNKDCGERAQYEPQSIEQADE
CCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHH
LFNLGALDNNIGSADVAGFESLDEQEQSRWAKTVVQPGQPLKIKWQFTANHKSKHFKFYI
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEE
TKPNWDPNKLLTRESFEEKPLNCYDPQPTWVAPNQPPKDGLTFTCTMPNRSGYQIIMAEW
ECCCCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEEC
DVDDTRMSFYNLLDLDFTTSKPAGTVILSDGSSSNNNGSQPSATSTYDPSKSYPTPGTEV
CCCHHHHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VFDGKVYQNKWYVNPGQQPGAEQWGPWAFVRDHQQQNNPSDKFPLEATKFTINPLNIKEG
EECCEEECCEEEECCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCEEEEEEEEECCCCCC
DKITLQVFKDGTMTDYPLLTVPKAISTNDLFLELTEKINKISTEQLNNQIIAGVKDSNNA
CEEEEEEEECCCCCCCCEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEEECCCCE
VIPNGNAVYIYQTADKPYDQISFYYHQANQNLKNELHLMDFKDQYNISSDGKLYINAKIM
ECCCCCEEEEEECCCCCCHHEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEE
SHSSATANVTVVLQDQNGNQVYRKTDIQISPMDTYDLALAIDNIKAGDYKLIISSELAGA
ECCCCCEEEEEEEECCCCCEEEEEECCEECCCCCEEEEEEEECCCCCCEEEEEECCCCCC
EAWQKDMNIKAVSSETSDDNNNPPPANQDINVNIESNTPYYQVNPNDSVTARAWASSLGN
HHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEHHHHHHHCCC
INLANNQVTIIAWNKTLQASGNDSSAYVKCPLPKNNQTSITYLVSGDLNNVNCTIK
EEECCCEEEEEEECCEEECCCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]