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The map label for this gene is garP [C]

Identifier: 134301315

GI number: 134301315

Start: 192432

End: 193712

Strand: Reverse

Name: garP [C]

Synonym: FTW_0189

Alternate gene names: 134301315

Gene position: 193712-192432 (Counterclockwise)

Preceding gene: 134301316

Following gene: 134301314

Centisome position: 10.2

GC content: 34.82

Gene sequence:

>1281_bases
ATGGATAAATCACATTTACCAAACACAAAAGTCCTAGTTACATTGTCTTGGATAATATGCTTAATTGCAACGTTAAATTA
TAGTTATGATTTTTTTATTCGTGCCGCACCAAGTGTCATGGGCAATAATTTAATTATTGATTTTGGTATTAGTCACACAG
AACTAGGTATGTTGTCATCAGCATACTTTGTATCATATACAATCATGCAAATACCTGCAGGAGTTATACTCGATAAATAT
AATCGTAAAGTAGTAATCAGTATTGCTACTGCCTTTTGTGTTTTAGGAAACTACTTGTTCTCAGCTACTAACTATTATGA
AGTAGCATATATTGGTAGGATATTTATGGGTATTGGCTCTGCATTTGGCTTTATAGGTGCAGCAAAAATGGCTGGGATGT
GGCTTCCAGAAAAGCTTTTCTCAACTTTCATAGGTTTTGCAACAGTCGTTGGGATTCTCGGTGGTCTAGTTACTGATACA
CTACTCTCAAGTTTAGTTTCTGACCTTGGTTGGAGAGACGGTAATGCAGTATTTACATACATAGGGGTTGGTATTCTACT
GCTTATCGTAATATTTATTCGTGATAATCCCAAACATGTTGCAAAATTTACCCACTTAAGTGAAGCCAACTTCAAAGAAA
CTATAGTCAAAGTACTAAAAATATTCTGTAACCTAAAGTTCTGGGCTGCAAGTATTATTGGTGCAGTATTATTTATTCCA
ATTAATGTTTTAGGTTCTCTATGGGGTGTAGGACTAATTCAAGCTAAATTTGGTTTAACCCAAGAAATTGCGTCACACTT
AAATGGCGCACTATTCATTGGTGCTGCAGTTGGTTTTACAGTTGCTGCGATTATTGCTTCACTGACAAATAGATATCGTC
TAATGCTTACTTTAAGTATAGTTTCACTTGCTATGCTTTTAGCTATAATACTTTATGTGCCGATGAGTTTATCGATGTTT
ACAGTGTTGTATTTCTTACTTGGAGCTGCTGCTGGTCCTCAAGCTGTAACATTTGGAATAGCTAAAATAATCTCACCAAA
AGGAACTACCGGATCAGCAACAGCGAGAGTAAATATGATAAACAACTTCGTACCAATTATTTTACTACCACTTGTCGGTT
ATATCCTTACACACTTTGGCACATTTATTGCAAACTCAAGAACTATATATACCATCACAAGTTATCAAAATGCTCTTGAT
ATGGTAATAATATTCTTATTAGTTTGCCTACCAATTGCTATGCTTATACCTAAGCAAATACAAGCAGATCTTAATCACTA
A

Upstream 100 bases:

>100_bases
AAAATATTTGCCTAAAACAAAAAGGAAATTATCTTACTACTTGGATAATTAATAACTCTTTGATATCCTAATATTTTAAG
ATAGTAATCTAGATTAATTT

Downstream 100 bases:

>100_bases
TTAATATTTCTAGAAGATATTCATTAAGATTTAAATGATCTCTTATTACTGCTCTTAAGACATTATATAACACCATATGA
TGAGAATCTCATTCAATTGG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Transporter; Facilitator Superfamily Transporter; Sugar Phosphate Permease; Transporter MFS Superfamily; Facilitator Superfamily Protein; Permease; Facilitator Family Transporter Transporter; Sugar Transporter; Facilitator Membrane Proteins; Transporter Facilitator Family; Facilitator Family Hexuronate Transporter; Intraphagosomal Amino Acid Transporter Family Protein; Transport Proteins; Multidrug ABC Transporter; Facilitator Superfamily Sugar Transporter; Facilitator Family Protein

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MDKSHLPNTKVLVTLSWIICLIATLNYSYDFFIRAAPSVMGNNLIIDFGISHTELGMLSSAYFVSYTIMQIPAGVILDKY
NRKVVISIATAFCVLGNYLFSATNYYEVAYIGRIFMGIGSAFGFIGAAKMAGMWLPEKLFSTFIGFATVVGILGGLVTDT
LLSSLVSDLGWRDGNAVFTYIGVGILLLIVIFIRDNPKHVAKFTHLSEANFKETIVKVLKIFCNLKFWAASIIGAVLFIP
INVLGSLWGVGLIQAKFGLTQEIASHLNGALFIGAAVGFTVAAIIASLTNRYRLMLTLSIVSLAMLLAIILYVPMSLSMF
TVLYFLLGAAAGPQAVTFGIAKIISPKGTTGSATARVNMINNFVPIILLPLVGYILTHFGTFIANSRTIYTITSYQNALD
MVIIFLLVCLPIAMLIPKQIQADLNH

Sequences:

>Translated_426_residues
MDKSHLPNTKVLVTLSWIICLIATLNYSYDFFIRAAPSVMGNNLIIDFGISHTELGMLSSAYFVSYTIMQIPAGVILDKY
NRKVVISIATAFCVLGNYLFSATNYYEVAYIGRIFMGIGSAFGFIGAAKMAGMWLPEKLFSTFIGFATVVGILGGLVTDT
LLSSLVSDLGWRDGNAVFTYIGVGILLLIVIFIRDNPKHVAKFTHLSEANFKETIVKVLKIFCNLKFWAASIIGAVLFIP
INVLGSLWGVGLIQAKFGLTQEIASHLNGALFIGAAVGFTVAAIIASLTNRYRLMLTLSIVSLAMLLAIILYVPMSLSMF
TVLYFLLGAAAGPQAVTFGIAKIISPKGTTGSATARVNMINNFVPIILLPLVGYILTHFGTFIANSRTIYTITSYQNALD
MVIIFLLVCLPIAMLIPKQIQADLNH
>Mature_426_residues
MDKSHLPNTKVLVTLSWIICLIATLNYSYDFFIRAAPSVMGNNLIIDFGISHTELGMLSSAYFVSYTIMQIPAGVILDKY
NRKVVISIATAFCVLGNYLFSATNYYEVAYIGRIFMGIGSAFGFIGAAKMAGMWLPEKLFSTFIGFATVVGILGGLVTDT
LLSSLVSDLGWRDGNAVFTYIGVGILLLIVIFIRDNPKHVAKFTHLSEANFKETIVKVLKIFCNLKFWAASIIGAVLFIP
INVLGSLWGVGLIQAKFGLTQEIASHLNGALFIGAAVGFTVAAIIASLTNRYRLMLTLSIVSLAMLLAIILYVPMSLSMF
TVLYFLLGAAAGPQAVTFGIAKIISPKGTTGSATARVNMINNFVPIILLPLVGYILTHFGTFIANSRTIYTITSYQNALD
MVIIFLLVCLPIAMLIPKQIQADLNH

Specific function: Uptake Of D-Galactarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789515, Length=213, Percent_Identity=26.2910798122066, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46251; Mature: 46251

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCC
>Mature Secondary Structure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HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA