| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is 134301234
Identifier: 134301234
GI number: 134301234
Start: 100072
End: 101613
Strand: Direct
Name: 134301234
Synonym: FTW_0091
Alternate gene names: NA
Gene position: 100072-101613 (Clockwise)
Preceding gene: 134301233
Following gene: 134301235
Centisome position: 5.27
GC content: 29.25
Gene sequence:
>1542_bases ATGTTATATAGACAAATAAAAACAGTTTTAAAAATTCCTAAACACACAGTGTATTCACTGGTTATATATAGTATATTATT AGGTTTTTTATCCCTTACTATCCCTGTTTCAGTGCAGACTTTGGTAAATCTGGTTGGTGTAAGCTTATCGATTAGACCAG TTATATCGCTAATAACAATTTTATTTATCTTTTTAACGGCAGCTTTCTTTGTTAGAATTTTTCAATTAAAGCTCGTCGAG GATATCCAAAGGAAGGTTTTTGTCGAAACCGTGCTTAGGATAATATCAGCTATTTATAAAGTTGATTTTAATGATTTGAT AAGGGTTAATGTTAGAGAGAAAATTAATAGAGCTTTTGAGCTAAAGTTTTTACAAAAATCTGTTTCTGTGATATTTATAA TTCTACTTGATATATTCCTACAGACGCTTTTCTGTGTGATTATTTTAGCATTCTATCATCCGATGTTTTTGGTCTTTGAT ATATTATTAATTACATGTATCGTATTAGTTATTTTTGTGCCAATGAGAGCTGGTTATGAGGCAGGTCTAAAAGAATCAAC TAATATTTATGATATTGTTTATTGGTTTGAAGAGAAAACTGCCGAGTTTTTATCATTTAGACAACGTCCAGAAGAAAGCT CTGTAAAGAAAGTAGATGCTAAATTATGTAACTACTTAGATGCTAGAGCTAACTTCTTTAGTGTAGTATTAAGACAACAT GTATATATTGGTTTGACATATATCTTTATTAATATTTTACTTTTAGGGATTGGTAGTTATCTAATAATTAATGGTCAACT ATCAATCGGTCAACTTATCGCTGCAGAGATACTTGTAAATATTGTGTTACTAGGCTTACTAAAATTTAGTCAATATCTTT ATGATTGTTATGGTTTTATGGTAGCAGTTCGCAAAATCTTAGATCTTTTAGAGATTTCCAAAAAGGATAGCCCAACATCT GAGCATAAAAATGCTAAATTAGAAACTGAGGTAACTTCTTTAGAGATAGCCTTGCCAGATTATCAAAAGGCGCGTTTTGA TTATACTCAAAACCATTTTAATAATCTTTGCCTGACAAGACAGCAGGCACAAAAATTATTAAATGCTTTTTTTGATGATA ATTCAGAAGAGATTATTAAGATAAATAATGTTTGTTTGAGTAATTATAGTAAAGAAGAAATTTGCAATAAGATTCATATA GCTAGCGGTATAGAAGTTGTCGCAGGTACTGTATTAGATAATTTATGTGAAAATGATTTTTCTCAAGAAAAATTAAAGTA TCTAAGCGAGTTATTAGATGCTTTTGGTGTTAGTTTTCTTGAGAAATATTTTGAGAAAAAGATTGATTCACAGACTATCA AATATAATCTAGAGTTTGATACTATGGTTGTACTTAAAATGAACTTGATAAGAGCTATTTTAAAACAGCCTAAGCTTCTG ATATTAATTGATTCATATGGCTTAACTAATAGAAGTAATATGACAATTACGCAGATATTGCAGAAATTAGCGGTGCCAAC ATTAATCATATCTATTCAATAG
Upstream 100 bases:
>100_bases TTACAAAATCTTAATAGTTTAAAAACATATCAGAAGTAGACATTATAAAAATCTTGATTATACTAAGAAGGTATAAATTT AAAGACCTTGTATTTTTATA
Downstream 100 bases:
>100_bases GAGGCTTTTGATGCAGTTAAAATCTTTTGAGATGCTAAAGAAGGATCTTAGCTTTAAGAAGATAATTTTGCTAGTGTTAC TAAGCATTATTGTCGTAGGT
Product: antibiotic ABC transporter
Products: NA
Alternate protein names: ABC Transporter Related Protein; ABC Transporter ; Bacteriocin/Lantibiotic ABC Transporter; ABC Transporter-Like Protein; ABC Transporter ATPase And Permeases; ABC Type Bacteriocin/Antibiotic Exporter; Hlyb/Msba Family ABC Transporter; ABC Transporter Membrane Protein; ABC Transporter ATPase And Permease; ABC Transporter Permease/ATPase
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MLYRQIKTVLKIPKHTVYSLVIYSILLGFLSLTIPVSVQTLVNLVGVSLSIRPVISLITILFIFLTAAFFVRIFQLKLVE DIQRKVFVETVLRIISAIYKVDFNDLIRVNVREKINRAFELKFLQKSVSVIFIILLDIFLQTLFCVIILAFYHPMFLVFD ILLITCIVLVIFVPMRAGYEAGLKESTNIYDIVYWFEEKTAEFLSFRQRPEESSVKKVDAKLCNYLDARANFFSVVLRQH VYIGLTYIFINILLLGIGSYLIINGQLSIGQLIAAEILVNIVLLGLLKFSQYLYDCYGFMVAVRKILDLLEISKKDSPTS EHKNAKLETEVTSLEIALPDYQKARFDYTQNHFNNLCLTRQQAQKLLNAFFDDNSEEIIKINNVCLSNYSKEEICNKIHI ASGIEVVAGTVLDNLCENDFSQEKLKYLSELLDAFGVSFLEKYFEKKIDSQTIKYNLEFDTMVVLKMNLIRAILKQPKLL ILIDSYGLTNRSNMTITQILQKLAVPTLIISIQ
Sequences:
>Translated_513_residues MLYRQIKTVLKIPKHTVYSLVIYSILLGFLSLTIPVSVQTLVNLVGVSLSIRPVISLITILFIFLTAAFFVRIFQLKLVE DIQRKVFVETVLRIISAIYKVDFNDLIRVNVREKINRAFELKFLQKSVSVIFIILLDIFLQTLFCVIILAFYHPMFLVFD ILLITCIVLVIFVPMRAGYEAGLKESTNIYDIVYWFEEKTAEFLSFRQRPEESSVKKVDAKLCNYLDARANFFSVVLRQH VYIGLTYIFINILLLGIGSYLIINGQLSIGQLIAAEILVNIVLLGLLKFSQYLYDCYGFMVAVRKILDLLEISKKDSPTS EHKNAKLETEVTSLEIALPDYQKARFDYTQNHFNNLCLTRQQAQKLLNAFFDDNSEEIIKINNVCLSNYSKEEICNKIHI ASGIEVVAGTVLDNLCENDFSQEKLKYLSELLDAFGVSFLEKYFEKKIDSQTIKYNLEFDTMVVLKMNLIRAILKQPKLL ILIDSYGLTNRSNMTITQILQKLAVPTLIISIQ >Mature_513_residues MLYRQIKTVLKIPKHTVYSLVIYSILLGFLSLTIPVSVQTLVNLVGVSLSIRPVISLITILFIFLTAAFFVRIFQLKLVE DIQRKVFVETVLRIISAIYKVDFNDLIRVNVREKINRAFELKFLQKSVSVIFIILLDIFLQTLFCVIILAFYHPMFLVFD ILLITCIVLVIFVPMRAGYEAGLKESTNIYDIVYWFEEKTAEFLSFRQRPEESSVKKVDAKLCNYLDARANFFSVVLRQH VYIGLTYIFINILLLGIGSYLIINGQLSIGQLIAAEILVNIVLLGLLKFSQYLYDCYGFMVAVRKILDLLEISKKDSPTS EHKNAKLETEVTSLEIALPDYQKARFDYTQNHFNNLCLTRQQAQKLLNAFFDDNSEEIIKINNVCLSNYSKEEICNKIHI ASGIEVVAGTVLDNLCENDFSQEKLKYLSELLDAFGVSFLEKYFEKKIDSQTIKYNLEFDTMVVLKMNLIRAILKQPKLL ILIDSYGLTNRSNMTITQILQKLAVPTLIISIQ
Specific function: Unknown
COG id: COG2274
COG function: function code V; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58966; Mature: 58966
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRQIKTVLKIPKHTVYSLVIYSILLGFLSLTIPVSVQTLVNLVGVSLSIRPVISLITI CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LFIFLTAAFFVRIFQLKLVEDIQRKVFVETVLRIISAIYKVDFNDLIRVNVREKINRAFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHHH LKFLQKSVSVIFIILLDIFLQTLFCVIILAFYHPMFLVFDILLITCIVLVIFVPMRAGYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGLKESTNIYDIVYWFEEKTAEFLSFRQRPEESSVKKVDAKLCNYLDARANFFSVVLRQH CCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYIGLTYIFINILLLGIGSYLIINGQLSIGQLIAAEILVNIVLLGLLKFSQYLYDCYGFM HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVRKILDLLEISKKDSPTSEHKNAKLETEVTSLEIALPDYQKARFDYTQNHFNNLCLTR HHHHHHHHHHHHCCCCCCCCHHCCCEEEEEHHEEEEECCCHHHHHCCHHHHHHHHHHHHH QQAQKLLNAFFDDNSEEIIKINNVCLSNYSKEEICNKIHIASGIEVVAGTVLDNLCENDF HHHHHHHHHHHCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC SQEKLKYLSELLDAFGVSFLEKYFEKKIDSQTIKYNLEFDTMVVLKMNLIRAILKQPKLL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEE ILIDSYGLTNRSNMTITQILQKLAVPTLIISIQ EEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MLYRQIKTVLKIPKHTVYSLVIYSILLGFLSLTIPVSVQTLVNLVGVSLSIRPVISLITI CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LFIFLTAAFFVRIFQLKLVEDIQRKVFVETVLRIISAIYKVDFNDLIRVNVREKINRAFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHHH LKFLQKSVSVIFIILLDIFLQTLFCVIILAFYHPMFLVFDILLITCIVLVIFVPMRAGYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGLKESTNIYDIVYWFEEKTAEFLSFRQRPEESSVKKVDAKLCNYLDARANFFSVVLRQH CCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYIGLTYIFINILLLGIGSYLIINGQLSIGQLIAAEILVNIVLLGLLKFSQYLYDCYGFM HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVRKILDLLEISKKDSPTSEHKNAKLETEVTSLEIALPDYQKARFDYTQNHFNNLCLTR HHHHHHHHHHHHCCCCCCCCHHCCCEEEEEHHEEEEECCCHHHHHCCHHHHHHHHHHHHH QQAQKLLNAFFDDNSEEIIKINNVCLSNYSKEEICNKIHIASGIEVVAGTVLDNLCENDF HHHHHHHHHHHCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC SQEKLKYLSELLDAFGVSFLEKYFEKKIDSQTIKYNLEFDTMVVLKMNLIRAILKQPKLL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEE ILIDSYGLTNRSNMTITQILQKLAVPTLIISIQ EEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA