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The map label for this gene is nhaD

Identifier: 134301219

GI number: 134301219

Start: 78291

End: 79718

Strand: Reverse

Name: nhaD

Synonym: FTW_0070

Alternate gene names: NA

Gene position: 79718-78291 (Counterclockwise)

Preceding gene: 134301221

Following gene: 134301209

Centisome position: 4.2

GC content: 35.15

Gene sequence:

>1428_bases
ATGTACAAAAAGATTATACTAATTTTATCAATAGTGCTGCTACCAATATTATCATTTGCAGAAGATGAGAAAACACTAAG
TGCTGTCAGTGTCAATGCGGTTAATCATCCTTTGGCAATAGCTGCTATTGTAGTTTTTATTTTAGCTTATCTACTAGTAA
TGACCGAGGATTTTACTAAACTAAATAAATCAAAGCCTGTAATTGTAGCTGCTGGAGTAATCTGGATTCTAGTGGCTATT
GTTGGTGAATCTCTAGGTGCTGATAATATTGTTCATAGCAACTTCAACCATATTATGACCGAATATGGCGAACTTTTACT
TTTCTTATTAGTTGCTATGGCATATATTAACTTAATGGAAGATCGTAACGTTTTTGCTAAACTAAAGAGTTCTCTTTTAC
GTGCTGGTTTTGGTTATCTAGCGACTTTTTGGCTTACTGGTATAATTGCGTTTTTCCTATCAGCAGTTGCGGATAACTTA
ACTACCGCTCTAGTTATGAGTACCGTTGTAATATCTATCGGTAAAGATAATAAAAAATTTATAACGATGGCTTGTGTCAA
TATCGTAGTTGCCGCAAATGCTGGTGGCGCTTTTTCACCATTTGGTGATATTACTACGCTTATGGTTTGGCAAACAGGCG
TTATTAAATTTACTGAATTCTTTGCAATATTCTTACCTTCACTTATCAATTTCTTAGTTCCTGCGATTATTATGAGCTTT
TTTATACCGAAAATGGAAACTCAATCAATAATTGAGGAAAAAGTTGAACTTAAACGTGGTGCTATTCCTGTTATAGTGTT
ATTCATTCTAACAATTGCTACAGCAGTAGCATTTGAACATACGCTTCACTTACCACCATCATTAGGAATGATGACAGGTT
TTGGCTATGTAATGATTTATAATTATTTCTACGGTCTAAAAATAGCCCATGAAAATAAAAATCCAAAAAAACATAAGATG
CCATCACATGCTTTTGATATTTTTGATAAAGTTAAAGAAGCTGAATGGGATACATTACTATTCTTCTATGGGATACTAGT
TTCTGTACAAGGTCTTGCTGCTCTTGGCTATTTAGGTATAGCTTCCCAATACATTTACACAGATATGCAATCTATTGCCC
CAAGCCTATTTTCCGCACATACTCAAGCAAACACTATAATTGGTATACTCTCAGCTATCATTGATAACATTCCCGTTATG
TTTGCTGTATTAAGTATGAACCCTACTATGGAGCATGCTCAATGGCTCTTAATCACACTTACCGCAGGCGTTGGGGGTAG
CTTATTAGCTATTGGATCTGCAGCTGGAGTTGCCGTGATGGGTAAATCTAAAGGTAAATATACATTTATTGGTCACCTAA
AATGGACTTGGGTAATTGCACTAGGGTATTTTGCGAGTATTATCGTTCATCTTCTAGTCAATCACTAG

Upstream 100 bases:

>100_bases
AGTGTATTAAAACTTATAAAACCAGCTTATTTAGTTTATTTTTAATTATATAGCTGTCGATGTTATAATAGCCCTTATTC
AAAGAATTCTATCAAATATA

Downstream 100 bases:

>100_bases
TAAGCTCAATAACTTTATCATGATATGCTTTAACTCTATCATTATGACTAACTGAGATATAAGCTAGACCTTTATCCTTA
AGTAGTTGATAGATTTTTTT

Product: Na+/H+ antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MYKKIILILSIVLLPILSFAEDEKTLSAVSVNAVNHPLAIAAIVVFILAYLLVMTEDFTKLNKSKPVIVAAGVIWILVAI
VGESLGADNIVHSNFNHIMTEYGELLLFLLVAMAYINLMEDRNVFAKLKSSLLRAGFGYLATFWLTGIIAFFLSAVADNL
TTALVMSTVVISIGKDNKKFITMACVNIVVAANAGGAFSPFGDITTLMVWQTGVIKFTEFFAIFLPSLINFLVPAIIMSF
FIPKMETQSIIEEKVELKRGAIPVIVLFILTIATAVAFEHTLHLPPSLGMMTGFGYVMIYNYFYGLKIAHENKNPKKHKM
PSHAFDIFDKVKEAEWDTLLFFYGILVSVQGLAALGYLGIASQYIYTDMQSIAPSLFSAHTQANTIIGILSAIIDNIPVM
FAVLSMNPTMEHAQWLLITLTAGVGGSLLAIGSAAGVAVMGKSKGKYTFIGHLKWTWVIALGYFASIIVHLLVNH

Sequences:

>Translated_475_residues
MYKKIILILSIVLLPILSFAEDEKTLSAVSVNAVNHPLAIAAIVVFILAYLLVMTEDFTKLNKSKPVIVAAGVIWILVAI
VGESLGADNIVHSNFNHIMTEYGELLLFLLVAMAYINLMEDRNVFAKLKSSLLRAGFGYLATFWLTGIIAFFLSAVADNL
TTALVMSTVVISIGKDNKKFITMACVNIVVAANAGGAFSPFGDITTLMVWQTGVIKFTEFFAIFLPSLINFLVPAIIMSF
FIPKMETQSIIEEKVELKRGAIPVIVLFILTIATAVAFEHTLHLPPSLGMMTGFGYVMIYNYFYGLKIAHENKNPKKHKM
PSHAFDIFDKVKEAEWDTLLFFYGILVSVQGLAALGYLGIASQYIYTDMQSIAPSLFSAHTQANTIIGILSAIIDNIPVM
FAVLSMNPTMEHAQWLLITLTAGVGGSLLAIGSAAGVAVMGKSKGKYTFIGHLKWTWVIALGYFASIIVHLLVNH
>Mature_475_residues
MYKKIILILSIVLLPILSFAEDEKTLSAVSVNAVNHPLAIAAIVVFILAYLLVMTEDFTKLNKSKPVIVAAGVIWILVAI
VGESLGADNIVHSNFNHIMTEYGELLLFLLVAMAYINLMEDRNVFAKLKSSLLRAGFGYLATFWLTGIIAFFLSAVADNL
TTALVMSTVVISIGKDNKKFITMACVNIVVAANAGGAFSPFGDITTLMVWQTGVIKFTEFFAIFLPSLINFLVPAIIMSF
FIPKMETQSIIEEKVELKRGAIPVIVLFILTIATAVAFEHTLHLPPSLGMMTGFGYVMIYNYFYGLKIAHENKNPKKHKM
PSHAFDIFDKVKEAEWDTLLFFYGILVSVQGLAALGYLGIASQYIYTDMQSIAPSLFSAHTQANTIIGILSAIIDNIPVM
FAVLSMNPTMEHAQWLLITLTAGVGGSLLAIGSAAGVAVMGKSKGKYTFIGHLKWTWVIALGYFASIIVHLLVNH

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000802
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 51949; Mature: 51949

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKIILILSIVLLPILSFAEDEKTLSAVSVNAVNHPLAIAAIVVFILAYLLVMTEDFTK
CHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNKSKPVIVAAGVIWILVAIVGESLGADNIVHSNFNHIMTEYGELLLFLLVAMAYINLME
HCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DRNVFAKLKSSLLRAGFGYLATFWLTGIIAFFLSAVADNLTTALVMSTVVISIGKDNKKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ITMACVNIVVAANAGGAFSPFGDITTLMVWQTGVIKFTEFFAIFLPSLINFLVPAIIMSF
HHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIPKMETQSIIEEKVELKRGAIPVIVLFILTIATAVAFEHTLHLPPSLGMMTGFGYVMIY
HCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NYFYGLKIAHENKNPKKHKMPSHAFDIFDKVKEAEWDTLLFFYGILVSVQGLAALGYLGI
HHHHHEEEEECCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASQYIYTDMQSIAPSLFSAHTQANTIIGILSAIIDNIPVMFAVLSMNPTMEHAQWLLITL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCEEEEEE
TAGVGGSLLAIGSAAGVAVMGKSKGKYTFIGHLKWTWVIALGYFASIIVHLLVNH
ECCCCCCCEEECCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKKIILILSIVLLPILSFAEDEKTLSAVSVNAVNHPLAIAAIVVFILAYLLVMTEDFTK
CHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNKSKPVIVAAGVIWILVAIVGESLGADNIVHSNFNHIMTEYGELLLFLLVAMAYINLME
HCCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DRNVFAKLKSSLLRAGFGYLATFWLTGIIAFFLSAVADNLTTALVMSTVVISIGKDNKKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ITMACVNIVVAANAGGAFSPFGDITTLMVWQTGVIKFTEFFAIFLPSLINFLVPAIIMSF
HHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIPKMETQSIIEEKVELKRGAIPVIVLFILTIATAVAFEHTLHLPPSLGMMTGFGYVMIY
HCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NYFYGLKIAHENKNPKKHKMPSHAFDIFDKVKEAEWDTLLFFYGILVSVQGLAALGYLGI
HHHHHEEEEECCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASQYIYTDMQSIAPSLFSAHTQANTIIGILSAIIDNIPVMFAVLSMNPTMEHAQWLLITL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCEEEEEE
TAGVGGSLLAIGSAAGVAVMGKSKGKYTFIGHLKWTWVIALGYFASIIVHLLVNH
ECCCCCCCEEECCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]