| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300516
Identifier: 134300516
GI number: 134300516
Start: 2906202
End: 2906921
Strand: Reverse
Name: 134300516
Synonym: Dred_2681
Alternate gene names: NA
Gene position: 2906921-2906202 (Counterclockwise)
Preceding gene: 134300517
Following gene: 134300515
Centisome position: 80.57
GC content: 49.86
Gene sequence:
>720_bases ATGAATATGTTTTCGCCTAAGCCCGACACGCCAATCCATTTGCTGTCTGGATTGCGAGGCCGGGTAACTTCAAAGTGTAT TCTGGTAGAGGCTAATGAACCTTGGCTTTCCATTGGCTCCGGCGTCTTGGGTGGGGGTATTGGTACTAAACTTCTTTTTC TAAATCGACAGGTGTCCAAAAATTATGATGCCTGCAACCCAAACCAGGAAATGACAAAATGGTTAGAGGCAACCCTGCCT TTTTGTCAAATAGACGCTTGCTCTGCTCTAATGACAGCCGCCTGGGTTAGTCATGGCGTATGGGCTCAACTGGCTTGTGG AACCCAGGAGGCTGTGGTCATCACCACCGCTGGCTTGAGCAATGCTTGTGCGGCAGGCCTAACGGTTTGTTTTTCTCAAA CCAAGCCCTGTCCGGGAACCATCAACATCATGGCCTTTTTGTCCCATTCGTTGACACCGGGAGGATTGGTTAATGCGGTG CAAACCATTACTGAAGCCAAGACCAGAACTCTGGGAGAGATGGGGGTTCGATGTCTTCAGTCGGGTTTTCCGGCCACTGG TACGGGTACCGATGCTGTCATTGTGGCGGGAAATCCCAAAGGACCTTTGGCGGATTATGCCGGCCCCACTACTGTAACCG GCTGTCTATTGGCCAACGGCGTTCAAAGAACTCTAACCGGAGCTATTCAAAAATATTGTCAAGCAATATCAGATAACTAG
Upstream 100 bases:
>100_bases GTTTATTTGTGCTTAGTACAAACAATTATTTTATAGCAAAGGAGATGTATTGTTTTTTTATCACTGAGGAAAAACAATCT ATGGAGGGCTGTCCGTGAAG
Downstream 100 bases:
>100_bases AAGGAGAAATGTGTAATGGGAAACCTCTTTTTTAATTCATCGATTGGCAAGAGAATCGTGTTGTTGTTCATGGTATGTTT TTTAACCAATCTGCTACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNMFSPKPDTPIHLLSGLRGRVTSKCILVEANEPWLSIGSGVLGGGIGTKLLFLNRQVSKNYDACNPNQEMTKWLEATLP FCQIDACSALMTAAWVSHGVWAQLACGTQEAVVITTAGLSNACAAGLTVCFSQTKPCPGTINIMAFLSHSLTPGGLVNAV QTITEAKTRTLGEMGVRCLQSGFPATGTGTDAVIVAGNPKGPLADYAGPTTVTGCLLANGVQRTLTGAIQKYCQAISDN
Sequences:
>Translated_239_residues MNMFSPKPDTPIHLLSGLRGRVTSKCILVEANEPWLSIGSGVLGGGIGTKLLFLNRQVSKNYDACNPNQEMTKWLEATLP FCQIDACSALMTAAWVSHGVWAQLACGTQEAVVITTAGLSNACAAGLTVCFSQTKPCPGTINIMAFLSHSLTPGGLVNAV QTITEAKTRTLGEMGVRCLQSGFPATGTGTDAVIVAGNPKGPLADYAGPTTVTGCLLANGVQRTLTGAIQKYCQAISDN >Mature_239_residues MNMFSPKPDTPIHLLSGLRGRVTSKCILVEANEPWLSIGSGVLGGGIGTKLLFLNRQVSKNYDACNPNQEMTKWLEATLP FCQIDACSALMTAAWVSHGVWAQLACGTQEAVVITTAGLSNACAAGLTVCFSQTKPCPGTINIMAFLSHSLTPGGLVNAV QTITEAKTRTLGEMGVRCLQSGFPATGTGTDAVIVAGNPKGPLADYAGPTTVTGCLLANGVQRTLTGAIQKYCQAISDN
Specific function: Unknown
COG id: COG1865
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24862; Mature: 24862
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMFSPKPDTPIHLLSGLRGRVTSKCILVEANEPWLSIGSGVLGGGIGTKLLFLNRQVSK CCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHCCCHHCCCHHHHHHEEEHHHHC NYDACNPNQEMTKWLEATLPFCQIDACSALMTAAWVSHGVWAQLACGTQEAVVITTAGLS CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCC NACAAGLTVCFSQTKPCPGTINIMAFLSHSLTPGGLVNAVQTITEAKTRTLGEMGVRCLQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGFPATGTGTDAVIVAGNPKGPLADYAGPTTVTGCLLANGVQRTLTGAIQKYCQAISDN CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNMFSPKPDTPIHLLSGLRGRVTSKCILVEANEPWLSIGSGVLGGGIGTKLLFLNRQVSK CCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHCCCHHCCCHHHHHHEEEHHHHC NYDACNPNQEMTKWLEATLPFCQIDACSALMTAAWVSHGVWAQLACGTQEAVVITTAGLS CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCC NACAAGLTVCFSQTKPCPGTINIMAFLSHSLTPGGLVNAVQTITEAKTRTLGEMGVRCLQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGFPATGTGTDAVIVAGNPKGPLADYAGPTTVTGCLLANGVQRTLTGAIQKYCQAISDN CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA