Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134300506

Identifier: 134300506

GI number: 134300506

Start: 2890990

End: 2892987

Strand: Reverse

Name: 134300506

Synonym: Dred_2671

Alternate gene names: NA

Gene position: 2892987-2890990 (Counterclockwise)

Preceding gene: 134300507

Following gene: 134300505

Centisome position: 80.18

GC content: 47.85

Gene sequence:

>1998_bases
ATGCAAAATATTTCTGCCAAGAGAGTTATGCTGCTGGGTATTGATGGTGCAGACCCGGCCTTTATGAAGCCCTTGATGGA
TGCTGGAAGGCTGCCAAATATAAAGAGAATGGCCGATATGGGAGCTTGCCATGAGAATTGTGAAATGATGGGTGCTGTAC
CCACCATTACCCCTCCCTGCTGGTCCACTCTGGGAAACGGTGCTTATCCTGGTACCCATGGTATCACCTGTTTTTGGACA
CATTTTAAGGGCAAGGCCTTAGATGAAATTGAGTTTGGTATGAACTCCCGTATCGTGAAGGCTGAAACCATCTGGAACTT
GTATGCCAAAAACGGTCACAAAGTGTTGGTATACCATTATCCTACTTCCTGGCCCCCGTCCGAGGATCCCGAAGTGTTGA
AAAACATTATCTTAGTAGACGGAACCTGCCCGGAAACCCCCTTTTTCACCGCCCAGGTGGACTACGAAAAAGTAGTAAAA
GCCAGTGAAAATTCCGAGTTCAAGGCCCCTGTCTATAAAGCCTGTGAGGTTGATGAAACCGGCGCCGGCTGCTTTATGAG
TGAAGAGATTTCCGATGAAAAGGGTAATACCTCCCTCAAAATGACCAGTATTGTATTAAGCGAAGCGGACGGCATTGACG
GTGAAAACGGTGCAGCGGGCAAACACGATGTTGTTCAAACACCCATTAAGCCTGCCAAAGGTTGGGTTGCTGCCCCGGCA
GGTGCCAAAGAATTCGGTATTATTGTTAATAAAGGTGAAACCAGACGCTACGGATTAATTCTGGCCAACGAAAAGGGTGA
ATATGATCGGGTAGCTATCTATAAGAGTAAGAAGGATGCTGAGCCAATGGTGGTGGTGAATACCACCGATTGGAGCGAAT
GTGTCTACGATGTATACAAGCAAGATGGTAAGGATGTTCGGATCGGTCGTTATTACCGTATTATGCACCTTGCCTCAGAT
GGCTCCGAGTTACGTTTGTACATTTCCTTTGCGGCGAACCTGGATGACTTCCACTTGATTCACCCTGAAGAATTAGGACG
CGAACTCTTTGACAAATTCGGCGTTATTCCCTTTGTTTCTCACTCCACCAGTCACGATAAAGAGCTGGCACAAATTGTAT
TGGAATCCTGGCAAAGACAGGCACGCTGGCATGCTGAGACTCTGAAATACCTGATTGAAAAGCACAACCCCACCCTGGTT
TATACCCATCTGCACTCGGTGGATCTGATGGGGCACCTGTTTACCGCTAACCTGCGTCCCAGCCACCAGGATCATGAGTT
TTTCCGTGAACTGATGGCCAAGAGCTACGAACTGTCCGATGATTGGGTAGGTGAGTTCTTGCCTTACATGGAGGACCAAG
AAACGACCCTCTTCTTGGTTTCCGACCACGGTCTAACAGCAGGGGAAGAAAATCCACCGTTGTTGGCTGATCCCTGGGGT
ATTAATGCCGGTGTTATGTCCGAACTGGGCTACATTGGCTTAAAAAATGACGAAAAAGGTAAGCCCGCCATTGATTGGAG
TAAAACAAAAGCGGTGGCCCAGCGTTCTGGGTATATATACATTAACCTGAAGGGTCGAGATCCCGAGGGTATTGTGGACC
CTTCAGAATACGATGAACTGGTTACCAAAATTATTGATGATCTCTATGCCTACAGAGATAAAAAGACCGGCAAGCGTGTG
GTAGCCTTTGCACTACGGTCAGAGGATCAGAAGATTATTGGTCTGGGCGGCGAAAACTGTGGTGACATTTACTACATTCT
GGAGCCGGATTTTAACCGGATTCACGGGGACTCATTACCGACCTATGGCAAACACGGTACCTCGGTAATGTCCATCTTTA
TTGCCGCAGGTGCCGGTGTAAAACAAAACTATCGTACCGAGCGGGTAATTCGCCAGGTGGACGTTGTTCCTACCATTGCA
GATCTGCTGGGAGGTCCCGTGCCGGCCCAATGCGAAGGCGGGATTCTTTATCAATTACTTAATAAATATGGTCAGTAG

Upstream 100 bases:

>100_bases
TCTTATTAACCTGTATTTGCTATCCCTATTGGAAATTAGTTGGCCTCTTCTAATATATGGTTTATTTTGTGGTAAAAAAT
GACATTAAGGAGGATGACCT

Downstream 100 bases:

>100_bases
CTGTTAACAACGAATATACGGTGAAAATGAAGTTTTTATTTTCACCGTATTTGTTCTTAAACTATAAATAATGAGAGGGA
TAGTATATGAGCAATACAAC

Product: type I phosphodiesterase/nucleotide pyrophosphatase

Products: NA

Alternate protein names: Phosphodiesterase/Nucleotide Pyrophosphatase

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPCWSTLGNGAYPGTHGITCFWT
HFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHYPTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVK
ASENSEFKAPVYKACEVDETGAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA
GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYKQDGKDVRIGRYYRIMHLASD
GSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVSHSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLV
YTHLHSVDLMGHLFTANLRPSHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG
INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDELVTKIIDDLYAYRDKKTGKRV
VAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLPTYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIA
DLLGGPVPAQCEGGILYQLLNKYGQ

Sequences:

>Translated_665_residues
MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPCWSTLGNGAYPGTHGITCFWT
HFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHYPTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVK
ASENSEFKAPVYKACEVDETGAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA
GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYKQDGKDVRIGRYYRIMHLASD
GSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVSHSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLV
YTHLHSVDLMGHLFTANLRPSHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG
INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDELVTKIIDDLYAYRDKKTGKRV
VAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLPTYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIA
DLLGGPVPAQCEGGILYQLLNKYGQ
>Mature_665_residues
MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPCWSTLGNGAYPGTHGITCFWT
HFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHYPTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVK
ASENSEFKAPVYKACEVDETGAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA
GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYKQDGKDVRIGRYYRIMHLASD
GSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVSHSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLV
YTHLHSVDLMGHLFTANLRPSHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG
INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDELVTKIIDDLYAYRDKKTGKRV
VAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLPTYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIA
DLLGGPVPAQCEGGILYQLLNKYGQ

Specific function: Unknown

COG id: COG3379

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74186; Mature: 74186

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPC
CCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCHHHCCCCCCCCCHH
WSTLGNGAYPGTHGITCFWTHFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHY
HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCEEEHHHHHHHEECCCCEEEEEEC
PTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVKASENSEFKAPVYKACEVDET
CCCCCCCCCHHHHHCEEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCCCHHHHCCCCCC
GAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA
CCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCEEECCC
GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYK
CCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHH
QDGKDVRIGRYYRIMHLASDGSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVS
CCCCEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCEEEC
HSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLVYTHLHSVDLMGHLFTANLRP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHEECCCCC
SHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG
CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCC
INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDEL
CCHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH
VTKIIDDLYAYRDKKTGKRVVAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLP
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCC
TYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIADLLGGPVPAQCEGGILYQLL
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
NKYGQ
HHHCC
>Mature Secondary Structure
MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPC
CCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCHHHCCCCCCCCCHH
WSTLGNGAYPGTHGITCFWTHFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHY
HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCEEEHHHHHHHEECCCCEEEEEEC
PTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVKASENSEFKAPVYKACEVDET
CCCCCCCCCHHHHHCEEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCCCHHHHCCCCCC
GAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA
CCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCEEECCC
GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYK
CCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHH
QDGKDVRIGRYYRIMHLASDGSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVS
CCCCEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCEEEC
HSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLVYTHLHSVDLMGHLFTANLRP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHEECCCCC
SHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG
CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCC
INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDEL
CCHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH
VTKIIDDLYAYRDKKTGKRVVAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLP
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCC
TYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIADLLGGPVPAQCEGGILYQLL
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
NKYGQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA