| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300503
Identifier: 134300503
GI number: 134300503
Start: 2888350
End: 2889228
Strand: Reverse
Name: 134300503
Synonym: Dred_2668
Alternate gene names: NA
Gene position: 2889228-2888350 (Counterclockwise)
Preceding gene: 134300504
Following gene: 134300496
Centisome position: 80.08
GC content: 40.61
Gene sequence:
>879_bases ATGATTTATATGTTAATGGTCTTCCTGGCCGGCTGCAGTTTTGGTTTGGTTTCAACAGTGGTAAAGCTGGCCTATGGCAG TGGTTTACAGCCGGATGCAGTAATTTTTGCTCAGTTTTTTTTAGGATGGGCTATTTTGGTAGCCCTTAGTTTGTTTGTGC CTCGCCATAAAATTGACCTTAAAACCGGACTCAAGCTAATCATGGTTGGCATAACCAATAGTTTAGCAGGAATATTATTC TTTTTATCCCTTAAGACACTTCCTGCTTCCATTGCCATTGTGATTATGTTTCAATTTACTTGGATTGGTGTAATTATTGA AGCCATCGCCGATCGCAAATGGCCTGGTAAAGAAAAAATCATCTCCCTGCCGTTTTTAATAATGGGTATATTATTGGCCG GTGGTGTATTTGGTAGCGAAATAAAACTAGATATCATGGGAGTTATTTATGCGTGTCTTACAGCCCTAACCTTTGCCTTT TTCATTTTCTTTAGTGGCTGCGTGGCACCGAATCATCCGCCCATAAACCGAAGTGTATGGATTATTTCTGGTGCACTTTT ATTTACTTTTGTTTTATATCCGCCTAAATTTTTAATAACTGGTGGTATAGAGGGCGGTTTATTGGGGTACGGTTTGGTCT TGGGTTTACTGGGGCCGGTTATCCCCACCTTGTTCCTAGCCAAAGGGGTACCTCAAATTGGACCAGGCATGGCAACCATT CTTGCTTCCTCTGAGTTACCCGTAGCTGTGATAGCATCGTCCATTATGCTGGGTGAATACGTATCACCATTACAATGGTG TGGCGTACTTTTAATTTTGTTAGGTATTTGTTTACCTCAATTAAGTCAATTGAAAAATCAAACAGGCAAAACAACTTAG
Upstream 100 bases:
>100_bases ATTAACAGAGCTTTTATAAGGATAATGGCGGGAAAATATAAGTTGTAAAAACTTTCTTCCCGCCTTATTTGCAATATATT TGTGAATGGAGAAAGATAAA
Downstream 100 bases:
>100_bases TAAAGTAAAAATATATGTTAATTTGAGTGAGAATTATATTTAGACCTTTTTCATATCAGGATTTTTTTCAAAAGAGTCGT TGATAAGTAGATCAACGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MIYMLMVFLAGCSFGLVSTVVKLAYGSGLQPDAVIFAQFFLGWAILVALSLFVPRHKIDLKTGLKLIMVGITNSLAGILF FLSLKTLPASIAIVIMFQFTWIGVIIEAIADRKWPGKEKIISLPFLIMGILLAGGVFGSEIKLDIMGVIYACLTALTFAF FIFFSGCVAPNHPPINRSVWIISGALLFTFVLYPPKFLITGGIEGGLLGYGLVLGLLGPVIPTLFLAKGVPQIGPGMATI LASSELPVAVIASSIMLGEYVSPLQWCGVLLILLGICLPQLSQLKNQTGKTT
Sequences:
>Translated_292_residues MIYMLMVFLAGCSFGLVSTVVKLAYGSGLQPDAVIFAQFFLGWAILVALSLFVPRHKIDLKTGLKLIMVGITNSLAGILF FLSLKTLPASIAIVIMFQFTWIGVIIEAIADRKWPGKEKIISLPFLIMGILLAGGVFGSEIKLDIMGVIYACLTALTFAF FIFFSGCVAPNHPPINRSVWIISGALLFTFVLYPPKFLITGGIEGGLLGYGLVLGLLGPVIPTLFLAKGVPQIGPGMATI LASSELPVAVIASSIMLGEYVSPLQWCGVLLILLGICLPQLSQLKNQTGKTT >Mature_292_residues MIYMLMVFLAGCSFGLVSTVVKLAYGSGLQPDAVIFAQFFLGWAILVALSLFVPRHKIDLKTGLKLIMVGITNSLAGILF FLSLKTLPASIAIVIMFQFTWIGVIIEAIADRKWPGKEKIISLPFLIMGILLAGGVFGSEIKLDIMGVIYACLTALTFAF FIFFSGCVAPNHPPINRSVWIISGALLFTFVLYPPKFLITGGIEGGLLGYGLVLGLLGPVIPTLFLAKGVPQIGPGMATI LASSELPVAVIASSIMLGEYVSPLQWCGVLLILLGICLPQLSQLKNQTGKTT
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31211; Mature: 31211
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYMLMVFLAGCSFGLVSTVVKLAYGSGLQPDAVIFAQFFLGWAILVALSLFVPRHKIDL CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KTGLKLIMVGITNSLAGILFFLSLKTLPASIAIVIMFQFTWIGVIIEAIADRKWPGKEKI HHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ISLPFLIMGILLAGGVFGSEIKLDIMGVIYACLTALTFAFFIFFSGCVAPNHPPINRSVW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH IISGALLFTFVLYPPKFLITGGIEGGLLGYGLVLGLLGPVIPTLFLAKGVPQIGPGMATI HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LASSELPVAVIASSIMLGEYVSPLQWCGVLLILLGICLPQLSQLKNQTGKTT HCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIYMLMVFLAGCSFGLVSTVVKLAYGSGLQPDAVIFAQFFLGWAILVALSLFVPRHKIDL CHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KTGLKLIMVGITNSLAGILFFLSLKTLPASIAIVIMFQFTWIGVIIEAIADRKWPGKEKI HHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ISLPFLIMGILLAGGVFGSEIKLDIMGVIYACLTALTFAFFIFFSGCVAPNHPPINRSVW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH IISGALLFTFVLYPPKFLITGGIEGGLLGYGLVLGLLGPVIPTLFLAKGVPQIGPGMATI HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LASSELPVAVIASSIMLGEYVSPLQWCGVLLILLGICLPQLSQLKNQTGKTT HCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA