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The map label for this gene is rpfG [H]

Identifier: 134300486

GI number: 134300486

Start: 2871391

End: 2872503

Strand: Reverse

Name: rpfG [H]

Synonym: Dred_2651

Alternate gene names: 134300486

Gene position: 2872503-2871391 (Counterclockwise)

Preceding gene: 134300490

Following gene: 134300483

Centisome position: 79.61

GC content: 39.89

Gene sequence:

>1113_bases
ATGAGAAAGATACCGTTGGATTACATAAGGCCAGGTATGCAAACTGCTAAAAGGGTTTACAGTGCATCAGGCCATGTTTT
ATTAAATGCTGGTGTTAAACTAACATCAGGCTACATCCAACAATTAAAAAAATTAGGTATTCCATCCCTATATATTGAAG
ATAAATTCACAGAGGACATTCTCATTAAAGATGTTATTCCAGATGAACTACGAATGCAAACCATTAAAGAGGTTAAAAAC
ATTTTTAGTAAGGAAGTCGGTTCGGGAAAATTCACCTATCAAGATGCAGCTAGGATGGAAAGAGCGGTGCAGGATATTAT
TACAGAGTTAATTTGCAATCGGGCTGCGGTGGTCAATATCACTGATATTAGGTCCTATGATGATTATACCTATGCCCATT
CTGTAAATGTTTGTATCCTTGCTATTTTAGCTGGTCTGTCAATGGAACTAAGTAAACCCTCCCTTTATCATTTAGGTATG
GGAGCTCTGTTACATGACATAGGAAAGGTGCAGATTCCCCGGGCCATACTGAACAAGCCTGGCAAACTTACGGCGGAAGA
ATTTACCGTAATTAAAAATCATTCAACCTATAGCTACAATAGTTTAAGAAAATATGAAGGTATCAGTCACCTAAGTGCCC
TAATAGCTTACGAACACCATGAAAAATATGATGGATCTGGCTATCCAAAGGGCCTTAAGCAAGGAGAAATTCATCAGCTT
TCTCAGATAACCGGTATGGTAGATATGTATGATGCACTAACCGCGGACAGGGTCTATCGTAAAGCTTTTCCGCCCCAGGA
AGCCTGCGAAATGATTGCGGCGGCCGGGAACTATTTTTTTGATTTCAATATTATTGATCCCTTTTTACGAAACATAGCGC
CCTACCCACTGGGAACCTTTGTGGAATTAAGCAATGGCTGTCTGGGGGTGGTGGTCGAAGTGGAAAAGGGGTATCCCGCT
AATCCTACGGTACGAGTGCTTTTGGATCAGAATAAAGAACCAACAAGTTCCTATTTAATAAACTTAGGGGAAAAATTGGA
TTTGGTTATCTCTCAGGTGGTGCCAGAAAATCAACTGTTAAAATTGGAACAGGGTAAACTAAAAGCTAGATAA

Upstream 100 bases:

>100_bases
TTTAAATCTAAATAAGGATTACGGTGGAGATGGCCGACCTATCGGCCATCTTTTATGTTAAAATAAAAAGAATACTTATT
AATATTGGTTAGGAGAGTTT

Downstream 100 bases:

>100_bases
AATATAAGTTGTTGGATGCTGACAAATCCATATAATATTATGACAATGGTCTAAATAGACATAGAGTACGGCAAGCTCCG
ACACTTTTAGTTTAGCATAT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MRKIPLDYIRPGMQTAKRVYSASGHVLLNAGVKLTSGYIQQLKKLGIPSLYIEDKFTEDILIKDVIPDELRMQTIKEVKN
IFSKEVGSGKFTYQDAARMERAVQDIITELICNRAAVVNITDIRSYDDYTYAHSVNVCILAILAGLSMELSKPSLYHLGM
GALLHDIGKVQIPRAILNKPGKLTAEEFTVIKNHSTYSYNSLRKYEGISHLSALIAYEHHEKYDGSGYPKGLKQGEIHQL
SQITGMVDMYDALTADRVYRKAFPPQEACEMIAAAGNYFFDFNIIDPFLRNIAPYPLGTFVELSNGCLGVVVEVEKGYPA
NPTVRVLLDQNKEPTSSYLINLGEKLDLVISQVVPENQLLKLEQGKLKAR

Sequences:

>Translated_370_residues
MRKIPLDYIRPGMQTAKRVYSASGHVLLNAGVKLTSGYIQQLKKLGIPSLYIEDKFTEDILIKDVIPDELRMQTIKEVKN
IFSKEVGSGKFTYQDAARMERAVQDIITELICNRAAVVNITDIRSYDDYTYAHSVNVCILAILAGLSMELSKPSLYHLGM
GALLHDIGKVQIPRAILNKPGKLTAEEFTVIKNHSTYSYNSLRKYEGISHLSALIAYEHHEKYDGSGYPKGLKQGEIHQL
SQITGMVDMYDALTADRVYRKAFPPQEACEMIAAAGNYFFDFNIIDPFLRNIAPYPLGTFVELSNGCLGVVVEVEKGYPA
NPTVRVLLDQNKEPTSSYLINLGEKLDLVISQVVPENQLLKLEQGKLKAR
>Mature_370_residues
MRKIPLDYIRPGMQTAKRVYSASGHVLLNAGVKLTSGYIQQLKKLGIPSLYIEDKFTEDILIKDVIPDELRMQTIKEVKN
IFSKEVGSGKFTYQDAARMERAVQDIITELICNRAAVVNITDIRSYDDYTYAHSVNVCILAILAGLSMELSKPSLYHLGM
GALLHDIGKVQIPRAILNKPGKLTAEEFTVIKNHSTYSYNSLRKYEGISHLSALIAYEHHEKYDGSGYPKGLKQGEIHQL
SQITGMVDMYDALTADRVYRKAFPPQEACEMIAAAGNYFFDFNIIDPFLRNIAPYPLGTFVELSNGCLGVVVEVEKGYPA
NPTVRVLLDQNKEPTSSYLINLGEKLDLVISQVVPENQLLKLEQGKLKAR

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 41423; Mature: 41423

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIPLDYIRPGMQTAKRVYSASGHVLLNAGVKLTSGYIQQLKKLGIPSLYIEDKFTEDI
CCCCCHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCHHH
LIKDVIPDELRMQTIKEVKNIFSKEVGSGKFTYQDAARMERAVQDIITELICNRAAVVNI
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEE
TDIRSYDDYTYAHSVNVCILAILAGLSMELSKPSLYHLGMGALLHDIGKVQIPRAILNKP
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC
GKLTAEEFTVIKNHSTYSYNSLRKYEGISHLSALIAYEHHEKYDGSGYPKGLKQGEIHQL
CCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
SQITGMVDMYDALTADRVYRKAFPPQEACEMIAAAGNYFFDFNIIDPFLRNIAPYPLGTF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCHH
VELSNGCLGVVVEVEKGYPANPTVRVLLDQNKEPTSSYLINLGEKLDLVISQVVPENQLL
EEECCCEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCCCEE
KLEQGKLKAR
EECCCCCCCC
>Mature Secondary Structure
MRKIPLDYIRPGMQTAKRVYSASGHVLLNAGVKLTSGYIQQLKKLGIPSLYIEDKFTEDI
CCCCCHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCHHH
LIKDVIPDELRMQTIKEVKNIFSKEVGSGKFTYQDAARMERAVQDIITELICNRAAVVNI
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEE
TDIRSYDDYTYAHSVNVCILAILAGLSMELSKPSLYHLGMGALLHDIGKVQIPRAILNKP
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC
GKLTAEEFTVIKNHSTYSYNSLRKYEGISHLSALIAYEHHEKYDGSGYPKGLKQGEIHQL
CCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
SQITGMVDMYDALTADRVYRKAFPPQEACEMIAAAGNYFFDFNIIDPFLRNIAPYPLGTF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCHH
VELSNGCLGVVVEVEKGYPANPTVRVLLDQNKEPTSSYLINLGEKLDLVISQVVPENQLL
EEECCCEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHCCCCCEE
KLEQGKLKAR
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]