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The map label for this gene is spo0A [H]

Identifier: 134300460

GI number: 134300460

Start: 2845561

End: 2845935

Strand: Reverse

Name: spo0A [H]

Synonym: Dred_2621

Alternate gene names: 134300460

Gene position: 2845935-2845561 (Counterclockwise)

Preceding gene: 134300461

Following gene: 134300459

Centisome position: 78.88

GC content: 45.33

Gene sequence:

>375_bases
ATGATGCAGAGTGCCACACAACAATGTAACCCAATTGAAGCACTGGAGCAGGCTAAAACAATGGCTGAACAGTTTCTTGC
AGTATATCCGGTTTTGGCGCCAGCGTTAGATGGACAAGCCCCTATTAGTGAGCCAACAACGGTTGAAAGACCGGTTGCCA
GTATTGATGACCAGATCACTCAATTGCTTTGGGATATAGGCATCCCGTCTCACGTGCAAGGTTATCACTACGCCAGGTCA
GCTATCAAGCTAATTATAGAAAACAGAACGATGAAGTTCGAAGCAACTAAAAAGCTTTACCCTGCGGTTGCGACAGAGTT
TAATACCACTCCAAGCAGTAGAAAGATCAATAAGGCATGCCATAGCGATAGCTGA

Upstream 100 bases:

>100_bases
GAACGGCGTCAATTAGCCCGACAGAACCGCAGGGCTGAAGGAAGGTAAAAGGCAGCTCTAAACGAGCGCAAGCCTAAACC
ATTAAAAGGAGGTGTAGAAA

Downstream 100 bases:

>100_bases
AGCTAAATGCAACGACTATTTTGACAAGTACTTTGATCAACCAACTAATATGCAATTCCTTAGTTGGTGTGTAGAACTCC
TAAAGCTACAGAAATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MMQSATQQCNPIEALEQAKTMAEQFLAVYPVLAPALDGQAPISEPTTVERPVASIDDQITQLLWDIGIPSHVQGYHYARS
AIKLIIENRTMKFEATKKLYPAVATEFNTTPSSRKINKACHSDS

Sequences:

>Translated_124_residues
MMQSATQQCNPIEALEQAKTMAEQFLAVYPVLAPALDGQAPISEPTTVERPVASIDDQITQLLWDIGIPSHVQGYHYARS
AIKLIIENRTMKFEATKKLYPAVATEFNTTPSSRKINKACHSDS
>Mature_124_residues
MMQSATQQCNPIEALEQAKTMAEQFLAVYPVLAPALDGQAPISEPTTVERPVASIDDQITQLLWDIGIPSHVQGYHYARS
AIKLIIENRTMKFEATKKLYPAVATEFNTTPSSRKINKACHSDS

Specific function: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR014879
- InterPro:   IPR012052
- InterPro:   IPR011991
- ProDom:   PD010908 [H]

Pfam domain/function: PF00072 Response_reg; PF08769 Spo0A_C [H]

EC number: NA

Molecular weight: Translated: 13719; Mature: 13719

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQSATQQCNPIEALEQAKTMAEQFLAVYPVLAPALDGQAPISEPTTVERPVASIDDQIT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
QLLWDIGIPSHVQGYHYARSAIKLIIENRTMKFEATKKLYPAVATEFNTTPSSRKINKAC
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HSDS
CCCC
>Mature Secondary Structure
MMQSATQQCNPIEALEQAKTMAEQFLAVYPVLAPALDGQAPISEPTTVERPVASIDDQIT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
QLLWDIGIPSHVQGYHYARSAIKLIIENRTMKFEATKKLYPAVATEFNTTPSSRKINKAC
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HSDS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA