| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300443
Identifier: 134300443
GI number: 134300443
Start: 2828295
End: 2829491
Strand: Reverse
Name: 134300443
Synonym: Dred_2604
Alternate gene names: NA
Gene position: 2829491-2828295 (Counterclockwise)
Preceding gene: 134300444
Following gene: 134300442
Centisome position: 78.42
GC content: 43.02
Gene sequence:
>1197_bases ATGAGAAACCTTGATTTATTACAGGCCAAGAAAGCAGAAATCATGAACAAGCTTAACCAGGCCATCAAAGACGGTAACGA GGAAGCTTTTGCCCAGGCTTTTACCGAGTTCACCGAAACCATCCAAGAGGCTGTCATGGATGAAGCCAAAGGGCTAGTGC AGGCTGCTGATGCCAATGTACTGGTAGGACGTGGAGTAAGACAACTGACATCGGAAGAAAACAACTACTTCCAGAAGGTT ATCGAGGCTATGCGGACAAGCAATCCTCAGCAAGCTCTTACCGATCTGGACGTGGTTATGCCGAAAACTGTTATTGATGC AGTATTCGATGACTTAGTTGAAACCCATCCCTTGCTCGATGCGATCAATTTCCAAAATACTAGCGGATTGATTGAATATC TAGTTAACGCCAATGGTTCTGAATTAGCATCCTGGGGAACTCTTACATCCACTATCGTCAAAGAGCTAACCTCTGGATTT AAGAAAATCAATATGAGCTTCCATAAGTTATCTGCTTTCCTGCCAGTAGCTAAGTCCATGCTGGATCTTGGTCCAACCTG GTTAGACAGATATGTTAGAGCAATCCTAGGCGAGGCTTTGGCTAACGGACTTGAAGAGGGCATTATTAACGGTACAGGTA AGGATATGCCTATTGGCATGAATCGACAGGTAGGTGAAGGCGTAACTGTTACCGATGGTGTGTATCCTTTGAAGGATACT GTGGCTGTCACAAGCCTTGATCCAGTTTCTTATGGTCAATTAATCTCTGGCATGGCTGTTGGCCCTAATGGAAAAACACG GGTTGTAAGAAGCGTTATTATGATTGTCAACCCTGTTGACTATTTACAAAAGGTTATGCCAGCTACTACTATCCGTGGGG CCGATGGAGCCTATGTAAACAATGTGTTACCTTTCCCCACGACAATTATTCAATCAACTCAGATTGCACAGGGTAAAGCA ATATTTGGTTTAGGTAATCGCTATTTTATGGGTATCGGGACAGCCAAGTCAGGTAAAATCGAATACTCTGACGAGTACAA ATTCCTCGAGGATGAAAGAGTATATCTCGTTAAGCTGTATGGCCATGGGGAACCGTTGGATAATACAGCTTTTGTTTATG CTAATATTTCCGGATTACAACCTGCAGTACATGAAGTTGTTGTAACAAATACTGTAAATACCCATGAGGTAGTTTAA
Upstream 100 bases:
>100_bases CGCCTAGCGAACCACCACCGGAACCGCCAAAAGAAAATAAAACCATAAAATTTATGGCGGCATTGTTCCGCTAATTTTTA TTTAAAGAAGGGAGAAAGCG
Downstream 100 bases:
>100_bases TTGGGGTGATATGGATGGCATTGCCAGAAGGATTACTGGAGGCTGTTAAAAACTACCTCGACATCACATGGGAAGATCCT GCCGGAGATGAAAAACTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MRNLDLLQAKKAEIMNKLNQAIKDGNEEAFAQAFTEFTETIQEAVMDEAKGLVQAADANVLVGRGVRQLTSEENNYFQKV IEAMRTSNPQQALTDLDVVMPKTVIDAVFDDLVETHPLLDAINFQNTSGLIEYLVNANGSELASWGTLTSTIVKELTSGF KKINMSFHKLSAFLPVAKSMLDLGPTWLDRYVRAILGEALANGLEEGIINGTGKDMPIGMNRQVGEGVTVTDGVYPLKDT VAVTSLDPVSYGQLISGMAVGPNGKTRVVRSVIMIVNPVDYLQKVMPATTIRGADGAYVNNVLPFPTTIIQSTQIAQGKA IFGLGNRYFMGIGTAKSGKIEYSDEYKFLEDERVYLVKLYGHGEPLDNTAFVYANISGLQPAVHEVVVTNTVNTHEVV
Sequences:
>Translated_398_residues MRNLDLLQAKKAEIMNKLNQAIKDGNEEAFAQAFTEFTETIQEAVMDEAKGLVQAADANVLVGRGVRQLTSEENNYFQKV IEAMRTSNPQQALTDLDVVMPKTVIDAVFDDLVETHPLLDAINFQNTSGLIEYLVNANGSELASWGTLTSTIVKELTSGF KKINMSFHKLSAFLPVAKSMLDLGPTWLDRYVRAILGEALANGLEEGIINGTGKDMPIGMNRQVGEGVTVTDGVYPLKDT VAVTSLDPVSYGQLISGMAVGPNGKTRVVRSVIMIVNPVDYLQKVMPATTIRGADGAYVNNVLPFPTTIIQSTQIAQGKA IFGLGNRYFMGIGTAKSGKIEYSDEYKFLEDERVYLVKLYGHGEPLDNTAFVYANISGLQPAVHEVVVTNTVNTHEVV >Mature_398_residues MRNLDLLQAKKAEIMNKLNQAIKDGNEEAFAQAFTEFTETIQEAVMDEAKGLVQAADANVLVGRGVRQLTSEENNYFQKV IEAMRTSNPQQALTDLDVVMPKTVIDAVFDDLVETHPLLDAINFQNTSGLIEYLVNANGSELASWGTLTSTIVKELTSGF KKINMSFHKLSAFLPVAKSMLDLGPTWLDRYVRAILGEALANGLEEGIINGTGKDMPIGMNRQVGEGVTVTDGVYPLKDT VAVTSLDPVSYGQLISGMAVGPNGKTRVVRSVIMIVNPVDYLQKVMPATTIRGADGAYVNNVLPFPTTIIQSTQIAQGKA IFGLGNRYFMGIGTAKSGKIEYSDEYKFLEDERVYLVKLYGHGEPLDNTAFVYANISGLQPAVHEVVVTNTVNTHEVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43345; Mature: 43345
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLDLLQAKKAEIMNKLNQAIKDGNEEAFAQAFTEFTETIQEAVMDEAKGLVQAADANV CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LVGRGVRQLTSEENNYFQKVIEAMRTSNPQQALTDLDVVMPKTVIDAVFDDLVETHPLLD EECCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AINFQNTSGLIEYLVNANGSELASWGTLTSTIVKELTSGFKKINMSFHKLSAFLPVAKSM HHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDLGPTWLDRYVRAILGEALANGLEEGIINGTGKDMPIGMNRQVGEGVTVTDGVYPLKDT HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC VAVTSLDPVSYGQLISGMAVGPNGKTRVVRSVIMIVNPVDYLQKVMPATTIRGADGAYVN EEEEECCCCHHHHHHCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHCHHHCCCCCCCHHC NVLPFPTTIIQSTQIAQGKAIFGLGNRYFMGIGTAKSGKIEYSDEYKFLEDERVYLVKLY CCCCCCHHHHCCCHHCCCCEEEECCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEE GHGEPLDNTAFVYANISGLQPAVHEVVVTNTVNTHEVV ECCCCCCCCEEEEEECCCCCHHHHHEEEECCCCHHCCC >Mature Secondary Structure MRNLDLLQAKKAEIMNKLNQAIKDGNEEAFAQAFTEFTETIQEAVMDEAKGLVQAADANV CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LVGRGVRQLTSEENNYFQKVIEAMRTSNPQQALTDLDVVMPKTVIDAVFDDLVETHPLLD EECCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AINFQNTSGLIEYLVNANGSELASWGTLTSTIVKELTSGFKKINMSFHKLSAFLPVAKSM HHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDLGPTWLDRYVRAILGEALANGLEEGIINGTGKDMPIGMNRQVGEGVTVTDGVYPLKDT HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC VAVTSLDPVSYGQLISGMAVGPNGKTRVVRSVIMIVNPVDYLQKVMPATTIRGADGAYVN EEEEECCCCHHHHHHCCCEECCCCHHHHHHHHHHHHCCHHHHHHHHCHHHCCCCCCCHHC NVLPFPTTIIQSTQIAQGKAIFGLGNRYFMGIGTAKSGKIEYSDEYKFLEDERVYLVKLY CCCCCCHHHHCCCHHCCCCEEEECCCEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEEE GHGEPLDNTAFVYANISGLQPAVHEVVVTNTVNTHEVV ECCCCCCCCEEEEEECCCCCHHHHHEEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA