| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300437
Identifier: 134300437
GI number: 134300437
Start: 2823612
End: 2825555
Strand: Reverse
Name: 134300437
Synonym: Dred_2598
Alternate gene names: NA
Gene position: 2825555-2823612 (Counterclockwise)
Preceding gene: 134300438
Following gene: 134300436
Centisome position: 78.31
GC content: 43.78
Gene sequence:
>1944_bases ATGAAGCGTGAAATCAAAACTACGCTTGCACTTGACGGCGAGAAGAAGTTTAAACAGGAACTGCAAAATGCAAGCAGACA ACTCAGAGTTCTTGGCAGCGAAATGAAGGCTAACACTGCAGCATTTAAGGGCAATGAGGATTCGCTAGAAGCGCTTACCT CCCGCGGCAATATTTACAGAAAACAGGTAGAGCAACAAAAAGAAATAGTTGCTGCTCTTGCAAGGGCCGTTGAGGAAAGT GCCCAGAAGTATGGTGACGCCGATAGACGTACTGATGAATACAGAATCAAGCTGAACAATGCTACTGCAGCTCTAAGTAG AATGGAAAGCGAGCTAAAGCAAAATAGCCAGGCAATAACTGAATTTGGTAATAATGCTGATAAATCATTGGATAATTTTA AGAACTCTTTGCAAAACACTGGGGATAGGCTAAAAGGCATTGGTCAATCAATGTCTGTGGCTTTTACTGCTCCTCTTGTA GGTGGTTTCTTTGCTGTCACCCAGGGTACGAAGGAGCTACGCGGAGATCTTGCTGTATTGGAAACTAACGCTCAGATAGC AGGCCAGAACATGGGTATTCTAAATGATGCTCTTGTCAAACTGCAGGCAGTTACCGGAGAGACTGACTCTAACATAGAAG GTTTATCCGAGTTGCTTGCCACTGGATTTAGAGATGAGCAATTAACTCAGTTGCTTGATTCACTATACGGAGCAGCCATC AAGTTTAAAGACACCATGAAATTCGAGGGTATCTCCGACGGACTCCAAGAAACGCTGGCTACAGGTGCAGCTGTTGGTCC ATTTGCTGAGTTATTAGAACGGTCAGGCATTGCACTGGACGGATTTAACGATGGGTTGACAGAAGCCATAGCAAAAGGTA CACAGGAACAATATGTATTAGACGTGCTCGCCAAGACAGGCCTTGCTAAAACATATGAAGCCTACCGGAAAAACAACGAG GAAATGGTCAAAGCAGAAGAAGCCAATTTTCGCATGCAGCAGTCTATGGCTAAGCTTGGGGCCTCTTTGGAGCCTTTGCT AACACCAATAATTAATAAAATTACCGAACTAGTTAACAAATTTAACGAGGCTGATCCTGCAACGCAAAAAATAATACTTA CTATTGGTGGCGTTGCCGCAGCCGCAGGCCCAACACTTGTTGCTGTAGGTAGTATGGCAACTGGATTTTCATCGGTAGTC GGGATTGCAGGAAAACTAGTTCCGAAGTTGAAAATATTTGCCGTTGGCATGGGCCCAGTAGGTATTGCCATAGCCGCTGT AACAACAGCAGGTGTGCTGCTCTATAAAAACTGGGACACTATTTCTGCGAAAGCGGGAGAATTAAAAGATAATACTGTTG CAAAATTTGAAGAGATAAAAACAGCCATAACCAATAAGGTTAACCTGGCTAAGACTAATGCGACAGCAGCAATAGACGGC ACTAAGGCGATGTTTTCAGCAAAAATAACAGAGATTCAGTCAGGCGTAAACAATAAGTTTGAAGCCATCAGGTCTGGGAT AACAAATAAAATCGATGCCGCAAAGGATTCAGTCGGTAGAGCAATTAACGAGATGAAAGGATTTTTTAACTTTAATTGGT CACTACCGAAAATTAAGCTACCACATTTTAATATCTCTGGTAGTTTTAGTTTGAATCCACCGAGGGTTCCTAGTTTTGGT GTTAATTGGTATGCTAAGGGTGGTATATTTGATGAACCTTCGATTATCGGTGTGGGCGAGGCTGGCAAGGAGGTAGTTGC CCCTGTAGATAAGCTGGTAGATATTATAAGGAATGCCTTTAAAGGTGAGAGAGCCGCAGTGGTAGGCGGTGGCGATGTGA TCGTCCAGCAGATGATCGTGAGAAACGACAATGACATAACCAGAATAGCACGGCAATTGTTCTACCTACAACAGGGCAAA ACGAGGGGGCTGGGGCTAAAATGA
Upstream 100 bases:
>100_bases AACTACACCCGGGCGTATAGTTAGGTTTTGGAAATGGACCCGTGGATATGACGAATACCTGCACTGGATACCAAAGAAAA AGCAACGGGAGGTGGAGTAA
Downstream 100 bases:
>100_bases GGGGCTTCAGCTTTAAAGGTCGCCACTGCAGCGAATATGGTGTAATCATGCGATCTAAAAATAGGCCAATTCTCTCTGGG GTTAATGATTCTTATTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Tape Measure Protein; Phage Tail Tape Measure Protein TP; Prophage; Phage-Related Protein-Like Protein; Phage Protein; Tail Protein; Phage-Related Minor Tail Protein; Phage-Like Protein; TMP Repeat-Containing Protein; Phage Tape Measure Protein
Number of amino acids: Translated: 647; Mature: 647
Protein sequence:
>647_residues MKREIKTTLALDGEKKFKQELQNASRQLRVLGSEMKANTAAFKGNEDSLEALTSRGNIYRKQVEQQKEIVAALARAVEES AQKYGDADRRTDEYRIKLNNATAALSRMESELKQNSQAITEFGNNADKSLDNFKNSLQNTGDRLKGIGQSMSVAFTAPLV GGFFAVTQGTKELRGDLAVLETNAQIAGQNMGILNDALVKLQAVTGETDSNIEGLSELLATGFRDEQLTQLLDSLYGAAI KFKDTMKFEGISDGLQETLATGAAVGPFAELLERSGIALDGFNDGLTEAIAKGTQEQYVLDVLAKTGLAKTYEAYRKNNE EMVKAEEANFRMQQSMAKLGASLEPLLTPIINKITELVNKFNEADPATQKIILTIGGVAAAAGPTLVAVGSMATGFSSVV GIAGKLVPKLKIFAVGMGPVGIAIAAVTTAGVLLYKNWDTISAKAGELKDNTVAKFEEIKTAITNKVNLAKTNATAAIDG TKAMFSAKITEIQSGVNNKFEAIRSGITNKIDAAKDSVGRAINEMKGFFNFNWSLPKIKLPHFNISGSFSLNPPRVPSFG VNWYAKGGIFDEPSIIGVGEAGKEVVAPVDKLVDIIRNAFKGERAAVVGGGDVIVQQMIVRNDNDITRIARQLFYLQQGK TRGLGLK
Sequences:
>Translated_647_residues MKREIKTTLALDGEKKFKQELQNASRQLRVLGSEMKANTAAFKGNEDSLEALTSRGNIYRKQVEQQKEIVAALARAVEES AQKYGDADRRTDEYRIKLNNATAALSRMESELKQNSQAITEFGNNADKSLDNFKNSLQNTGDRLKGIGQSMSVAFTAPLV GGFFAVTQGTKELRGDLAVLETNAQIAGQNMGILNDALVKLQAVTGETDSNIEGLSELLATGFRDEQLTQLLDSLYGAAI KFKDTMKFEGISDGLQETLATGAAVGPFAELLERSGIALDGFNDGLTEAIAKGTQEQYVLDVLAKTGLAKTYEAYRKNNE EMVKAEEANFRMQQSMAKLGASLEPLLTPIINKITELVNKFNEADPATQKIILTIGGVAAAAGPTLVAVGSMATGFSSVV GIAGKLVPKLKIFAVGMGPVGIAIAAVTTAGVLLYKNWDTISAKAGELKDNTVAKFEEIKTAITNKVNLAKTNATAAIDG TKAMFSAKITEIQSGVNNKFEAIRSGITNKIDAAKDSVGRAINEMKGFFNFNWSLPKIKLPHFNISGSFSLNPPRVPSFG VNWYAKGGIFDEPSIIGVGEAGKEVVAPVDKLVDIIRNAFKGERAAVVGGGDVIVQQMIVRNDNDITRIARQLFYLQQGK TRGLGLK >Mature_647_residues MKREIKTTLALDGEKKFKQELQNASRQLRVLGSEMKANTAAFKGNEDSLEALTSRGNIYRKQVEQQKEIVAALARAVEES AQKYGDADRRTDEYRIKLNNATAALSRMESELKQNSQAITEFGNNADKSLDNFKNSLQNTGDRLKGIGQSMSVAFTAPLV GGFFAVTQGTKELRGDLAVLETNAQIAGQNMGILNDALVKLQAVTGETDSNIEGLSELLATGFRDEQLTQLLDSLYGAAI KFKDTMKFEGISDGLQETLATGAAVGPFAELLERSGIALDGFNDGLTEAIAKGTQEQYVLDVLAKTGLAKTYEAYRKNNE EMVKAEEANFRMQQSMAKLGASLEPLLTPIINKITELVNKFNEADPATQKIILTIGGVAAAAGPTLVAVGSMATGFSSVV GIAGKLVPKLKIFAVGMGPVGIAIAAVTTAGVLLYKNWDTISAKAGELKDNTVAKFEEIKTAITNKVNLAKTNATAAIDG TKAMFSAKITEIQSGVNNKFEAIRSGITNKIDAAKDSVGRAINEMKGFFNFNWSLPKIKLPHFNISGSFSLNPPRVPSFG VNWYAKGGIFDEPSIIGVGEAGKEVVAPVDKLVDIIRNAFKGERAAVVGGGDVIVQQMIVRNDNDITRIARQLFYLQQGK TRGLGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69495; Mature: 69495
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREIKTTLALDGEKKFKQELQNASRQLRVLGSEMKANTAAFKGNEDSLEALTSRGNIYR CCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCHHHH KQVEQQKEIVAALARAVEESAQKYGDADRRTDEYRIKLNNATAALSRMESELKQNSQAIT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH EFGNNADKSLDNFKNSLQNTGDRLKGIGQSMSVAFTAPLVGGFFAVTQGTKELRGDLAVL HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHCCHHHHCCCEEEE ETNAQIAGQNMGILNDALVKLQAVTGETDSNIEGLSELLATGFRDEQLTQLLDSLYGAAI ECCCHHCCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEE KFKDTMKFEGISDGLQETLATGAAVGPFAELLERSGIALDGFNDGLTEAIAKGTQEQYVL EECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHCCCHHHHHH DVLAKTGLAKTYEAYRKNNEEMVKAEEANFRMQQSMAKLGASLEPLLTPIINKITELVNK HHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FNEADPATQKIILTIGGVAAAAGPTLVAVGSMATGFSSVVGIAGKLVPKLKIFAVGMGPV HCCCCCCHHEEEEEECCHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCHH GIAIAAVTTAGVLLYKNWDTISAKAGELKDNTVAKFEEIKTAITNKVNLAKTNATAAIDG HHHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEECC TKAMFSAKITEIQSGVNNKFEAIRSGITNKIDAAKDSVGRAINEMKGFFNFNWSLPKIKL HHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEC PHFNISGSFSLNPPRVPSFGVNWYAKGGIFDEPSIIGVGEAGKEVVAPVDKLVDIIRNAF CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHC KGERAAVVGGGDVIVQQMIVRNDNDITRIARQLFYLQQGKTRGLGLK CCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKREIKTTLALDGEKKFKQELQNASRQLRVLGSEMKANTAAFKGNEDSLEALTSRGNIYR CCCCHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCHHHH KQVEQQKEIVAALARAVEESAQKYGDADRRTDEYRIKLNNATAALSRMESELKQNSQAIT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH EFGNNADKSLDNFKNSLQNTGDRLKGIGQSMSVAFTAPLVGGFFAVTQGTKELRGDLAVL HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHCCHHHHCCCEEEE ETNAQIAGQNMGILNDALVKLQAVTGETDSNIEGLSELLATGFRDEQLTQLLDSLYGAAI ECCCHHCCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEE KFKDTMKFEGISDGLQETLATGAAVGPFAELLERSGIALDGFNDGLTEAIAKGTQEQYVL EECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHCCCHHHHHH DVLAKTGLAKTYEAYRKNNEEMVKAEEANFRMQQSMAKLGASLEPLLTPIINKITELVNK HHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FNEADPATQKIILTIGGVAAAAGPTLVAVGSMATGFSSVVGIAGKLVPKLKIFAVGMGPV HCCCCCCHHEEEEEECCHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCHH GIAIAAVTTAGVLLYKNWDTISAKAGELKDNTVAKFEEIKTAITNKVNLAKTNATAAIDG HHHHHHHHHHCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEECC TKAMFSAKITEIQSGVNNKFEAIRSGITNKIDAAKDSVGRAINEMKGFFNFNWSLPKIKL HHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEC PHFNISGSFSLNPPRVPSFGVNWYAKGGIFDEPSIIGVGEAGKEVVAPVDKLVDIIRNAF CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHC KGERAAVVGGGDVIVQQMIVRNDNDITRIARQLFYLQQGKTRGLGLK CCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA