Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134300436

Identifier: 134300436

GI number: 134300436

Start: 2822887

End: 2823615

Strand: Reverse

Name: 134300436

Synonym: Dred_2597

Alternate gene names: NA

Gene position: 2823615-2822887 (Counterclockwise)

Preceding gene: 134300437

Following gene: 134300435

Centisome position: 78.26

GC content: 41.56

Gene sequence:

>729_bases
ATGAGGGGCTTCAGCTTTAAAGGTCGCCACTGCAGCGAATATGGTGTAATCATGCGATCTAAAAATAGGCCAATTCTCTC
TGGGGTTAATGATTCTTATTTACAGATACCAGGGAGACACGGGACATATTTATTTGGGGGTGAATTGGCAGATCGGACAA
TTGATCTCGAATGTGCTATCCTGGCCGGTTCCCTGCCTGACCTCAGGTCTAAGTTTAGGGAAATATCATCCTGGTTGTAC
TCACCAAAACGCGAAAATCTGGTTTTTGATGATGAGCTAGATAAGTATTATTTAGCAAAACTAGACGGGCAAATTGATGT
AGAACAAGCACGAGCTACAGGAAAATTTGATCTAAAGTTTAGGTGTGAACCATTAGCTTACGGTGGAGACATTGAAAATT
TATTTATTAATGACCAGGTTACTGTTTTTAACCAAGGAACATATGAGGCTTTACCGTTATTTCAGTCAACTTTTATTCAA
CCAGCGACTGAATGGCGGGTAAATAAAGCAACAGAGTATATTAGAGTCGTTAGAGGTTTTGCCCCTGGTGATGTACTGGA
GGTAAACTGTGCCACCGGTGCAATATTACTAAACAGCGTAAGGATACTGGAGAGCCTAGACTGGCAGAACAGTATCTTTT
TTGCTTTCCCGCCTGGTGAGCATACCTTGAATATCGCGCCTGCAGGAGTATGCAATACTAAAATAATTTATAAGCCGAGG
TGGTTGTAA

Upstream 100 bases:

>100_bases
TCGTCCAGCAGATGATCGTGAGAAACGACAATGACATAACCAGAATAGCACGGCAATTGTTCTACCTACAACAGGGCAAA
ACGAGGGGGCTGGGGCTAAA

Downstream 100 bases:

>100_bases
TGAACTCGGTAGTCATTGAAGCAAGCAAAAACAGTGTGATCATAGAGGCTGTTGATATTGAAACTATAATTCACTTTCTG
ACCTCATCATTGGTGATGGA

Product: phage putative tail component

Products: NA

Alternate protein names: Phage Tail Component; Phage Tail Fiber Protein; Phage Tail Component N-Terminal Domain

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAILAGSLPDLRSKFREISSWLY
SPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKFRCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQ
PATEWRVNKATEYIRVVRGFAPGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR
WL

Sequences:

>Translated_242_residues
MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAILAGSLPDLRSKFREISSWLY
SPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKFRCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQ
PATEWRVNKATEYIRVVRGFAPGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR
WL
>Mature_242_residues
MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAILAGSLPDLRSKFREISSWLY
SPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKFRCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQ
PATEWRVNKATEYIRVVRGFAPGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR
WL

Specific function: Unknown

COG id: COG4722

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27403; Mature: 27403

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAI
CCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEECCCCCCEEECCCCCCCEEEEEEEE
LAGSLPDLRSKFREISSWLYSPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKF
EECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCEEEHHHHCCCCCEEEEE
RCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQPATEWRVNKATEYIRVVRGF
EECEEECCCCCCEEEECCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
APGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCEEEECCC
WL
CC
>Mature Secondary Structure
MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAI
CCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEECCCCCCEEECCCCCCCEEEEEEEE
LAGSLPDLRSKFREISSWLYSPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKF
EECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCEEEHHHHCCCCCEEEEE
RCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQPATEWRVNKATEYIRVVRGF
EECEEECCCCCCEEEECCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
APGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCEEEECCC
WL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA