| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300436
Identifier: 134300436
GI number: 134300436
Start: 2822887
End: 2823615
Strand: Reverse
Name: 134300436
Synonym: Dred_2597
Alternate gene names: NA
Gene position: 2823615-2822887 (Counterclockwise)
Preceding gene: 134300437
Following gene: 134300435
Centisome position: 78.26
GC content: 41.56
Gene sequence:
>729_bases ATGAGGGGCTTCAGCTTTAAAGGTCGCCACTGCAGCGAATATGGTGTAATCATGCGATCTAAAAATAGGCCAATTCTCTC TGGGGTTAATGATTCTTATTTACAGATACCAGGGAGACACGGGACATATTTATTTGGGGGTGAATTGGCAGATCGGACAA TTGATCTCGAATGTGCTATCCTGGCCGGTTCCCTGCCTGACCTCAGGTCTAAGTTTAGGGAAATATCATCCTGGTTGTAC TCACCAAAACGCGAAAATCTGGTTTTTGATGATGAGCTAGATAAGTATTATTTAGCAAAACTAGACGGGCAAATTGATGT AGAACAAGCACGAGCTACAGGAAAATTTGATCTAAAGTTTAGGTGTGAACCATTAGCTTACGGTGGAGACATTGAAAATT TATTTATTAATGACCAGGTTACTGTTTTTAACCAAGGAACATATGAGGCTTTACCGTTATTTCAGTCAACTTTTATTCAA CCAGCGACTGAATGGCGGGTAAATAAAGCAACAGAGTATATTAGAGTCGTTAGAGGTTTTGCCCCTGGTGATGTACTGGA GGTAAACTGTGCCACCGGTGCAATATTACTAAACAGCGTAAGGATACTGGAGAGCCTAGACTGGCAGAACAGTATCTTTT TTGCTTTCCCGCCTGGTGAGCATACCTTGAATATCGCGCCTGCAGGAGTATGCAATACTAAAATAATTTATAAGCCGAGG TGGTTGTAA
Upstream 100 bases:
>100_bases TCGTCCAGCAGATGATCGTGAGAAACGACAATGACATAACCAGAATAGCACGGCAATTGTTCTACCTACAACAGGGCAAA ACGAGGGGGCTGGGGCTAAA
Downstream 100 bases:
>100_bases TGAACTCGGTAGTCATTGAAGCAAGCAAAAACAGTGTGATCATAGAGGCTGTTGATATTGAAACTATAATTCACTTTCTG ACCTCATCATTGGTGATGGA
Product: phage putative tail component
Products: NA
Alternate protein names: Phage Tail Component; Phage Tail Fiber Protein; Phage Tail Component N-Terminal Domain
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAILAGSLPDLRSKFREISSWLY SPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKFRCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQ PATEWRVNKATEYIRVVRGFAPGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR WL
Sequences:
>Translated_242_residues MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAILAGSLPDLRSKFREISSWLY SPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKFRCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQ PATEWRVNKATEYIRVVRGFAPGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR WL >Mature_242_residues MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAILAGSLPDLRSKFREISSWLY SPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKFRCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQ PATEWRVNKATEYIRVVRGFAPGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR WL
Specific function: Unknown
COG id: COG4722
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27403; Mature: 27403
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAI CCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEECCCCCCEEECCCCCCCEEEEEEEE LAGSLPDLRSKFREISSWLYSPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKF EECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCEEEHHHHCCCCCEEEEE RCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQPATEWRVNKATEYIRVVRGF EECEEECCCCCCEEEECCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC APGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCEEEECCC WL CC >Mature Secondary Structure MRGFSFKGRHCSEYGVIMRSKNRPILSGVNDSYLQIPGRHGTYLFGGELADRTIDLECAI CCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEECCCCCCEEECCCCCCCEEEEEEEE LAGSLPDLRSKFREISSWLYSPKRENLVFDDELDKYYLAKLDGQIDVEQARATGKFDLKF EECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEECCEEEHHHHCCCCCEEEEE RCEPLAYGGDIENLFINDQVTVFNQGTYEALPLFQSTFIQPATEWRVNKATEYIRVVRGF EECEEECCCCCCEEEECCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC APGDVLEVNCATGAILLNSVRILESLDWQNSIFFAFPPGEHTLNIAPAGVCNTKIIYKPR CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCEEEECCC WL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA