| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300435
Identifier: 134300435
GI number: 134300435
Start: 2821587
End: 2822450
Strand: Reverse
Name: 134300435
Synonym: Dred_2596
Alternate gene names: NA
Gene position: 2822450-2821587 (Counterclockwise)
Preceding gene: 134300436
Following gene: 134300434
Centisome position: 78.23
GC content: 44.91
Gene sequence:
>864_bases ATGACTTGGGATACTAAACCTATCAAACGCTCCCAGGGAGACCCCGTGCCCCAGGGGTTTGACCCTACACTAGATGAATA CCAGGTTGCGCATATTACTAAAAATGCACTCTGGCAAGCGTTGGTTGATCCTAACACTGGTCAGTTTATCGGTATTACCG ATGGAAAAATAAACATCCGGGCAAGTGAGATTGAAATTATCCTGGCAAGTTTAGCCACTGCAGCTAATCAAGCTATCATT ATTAGTCACGTAGATGGCGTAGAAACAGCCTTAACCACGCTCAATGAGTATGTTGACCAGTTAGAAACAATTTTAACAGC AATGAAAGAAACAGCTGGCATCAAGAAAATTACAGATGCTGTGGATGTTGCAGACAGATCAGAACGAGCACTGGGAAATG TTACGGTAAACAACTCAGCTTTGCCGACCGGCGCTGCTACCAGTGCCAAACAGGATTCTATTATTAGCAATATCGATGAG TTAGAGACGATCCTGAAGGCCATCCGCGATACCAGCGGCATTAAGAAAATTACCGATGCTGTAGATATCTCTGATAGAGC CGCCAGAGCTCTAGGTAAAATTGCAGCTGATGATGCAGCCTTGACACAGTTAGGAGCCATGGCAGCGGCAGCTGTGACGG ATCCGACTGCAGCCGCAACTGTTATTGCATTGTTAAAAGGTATACTAAAGCAACTCCAAACCGGCCCCAATGTTATGCAA CTCTCGGGTAGTAGTCTTGAAATATATAAAGCTACTGTAGACGAAAGACCAGAAGCAAATACCGTACCTGTTGGTTGTGT ATTTATGGCCGTTCAAACCCAAGAGATGTGGCAATCAGACGGTACTAATTGGGTGGTGATTTAA
Upstream 100 bases:
>100_bases AGAATTTAGAGTTACCTACCCAGACGGAAACAGAGAGACGTTTCCAAATAACGGGCATATTCCGGTATATATTTACCCTA ACCTAGGAGAGTGATAAAAA
Downstream 100 bases:
>100_bases GGTGAGTTTAATTGATTTAGCAAGAGCCAAGGGATATACAAACGAACAACTAAACAAAAACAACAATAACAACCAACCGA CACAAACATTAACTTTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTWDTKPIKRSQGDPVPQGFDPTLDEYQVAHITKNALWQALVDPNTGQFIGITDGKINIRASEIEIILASLATAANQAII ISHVDGVETALTTLNEYVDQLETILTAMKETAGIKKITDAVDVADRSERALGNVTVNNSALPTGAATSAKQDSIISNIDE LETILKAIRDTSGIKKITDAVDISDRAARALGKIAADDAALTQLGAMAAAAVTDPTAAATVIALLKGILKQLQTGPNVMQ LSGSSLEIYKATVDERPEANTVPVGCVFMAVQTQEMWQSDGTNWVVI
Sequences:
>Translated_287_residues MTWDTKPIKRSQGDPVPQGFDPTLDEYQVAHITKNALWQALVDPNTGQFIGITDGKINIRASEIEIILASLATAANQAII ISHVDGVETALTTLNEYVDQLETILTAMKETAGIKKITDAVDVADRSERALGNVTVNNSALPTGAATSAKQDSIISNIDE LETILKAIRDTSGIKKITDAVDISDRAARALGKIAADDAALTQLGAMAAAAVTDPTAAATVIALLKGILKQLQTGPNVMQ LSGSSLEIYKATVDERPEANTVPVGCVFMAVQTQEMWQSDGTNWVVI >Mature_286_residues TWDTKPIKRSQGDPVPQGFDPTLDEYQVAHITKNALWQALVDPNTGQFIGITDGKINIRASEIEIILASLATAANQAIII SHVDGVETALTTLNEYVDQLETILTAMKETAGIKKITDAVDVADRSERALGNVTVNNSALPTGAATSAKQDSIISNIDEL ETILKAIRDTSGIKKITDAVDISDRAARALGKIAADDAALTQLGAMAAAAVTDPTAAATVIALLKGILKQLQTGPNVMQL SGSSLEIYKATVDERPEANTVPVGCVFMAVQTQEMWQSDGTNWVVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30424; Mature: 30293
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWDTKPIKRSQGDPVPQGFDPTLDEYQVAHITKNALWQALVDPNTGQFIGITDGKINIR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEE ASEIEIILASLATAANQAIIISHVDGVETALTTLNEYVDQLETILTAMKETAGIKKITDA HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VDVADRSERALGNVTVNNSALPTGAATSAKQDSIISNIDELETILKAIRDTSGIKKITDA HHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VDISDRAARALGKIAADDAALTQLGAMAAAAVTDPTAAATVIALLKGILKQLQTGPNVMQ HCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEE LSGSSLEIYKATVDERPEANTVPVGCVFMAVQTQEMWQSDGTNWVVI ECCCCEEEEEECCCCCCCCCCCCHHHHEEEHHHHHHHHCCCCEEEEC >Mature Secondary Structure TWDTKPIKRSQGDPVPQGFDPTLDEYQVAHITKNALWQALVDPNTGQFIGITDGKINIR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEE ASEIEIILASLATAANQAIIISHVDGVETALTTLNEYVDQLETILTAMKETAGIKKITDA HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VDVADRSERALGNVTVNNSALPTGAATSAKQDSIISNIDELETILKAIRDTSGIKKITDA HHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VDISDRAARALGKIAADDAALTQLGAMAAAAVTDPTAAATVIALLKGILKQLQTGPNVMQ HCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEE LSGSSLEIYKATVDERPEANTVPVGCVFMAVQTQEMWQSDGTNWVVI ECCCCEEEEEECCCCCCCCCCCCHHHHEEEHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA