| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300434
Identifier: 134300434
GI number: 134300434
Start: 2819798
End: 2821585
Strand: Reverse
Name: 134300434
Synonym: Dred_2595
Alternate gene names: NA
Gene position: 2821585-2819798 (Counterclockwise)
Preceding gene: 134300435
Following gene: 134300433
Centisome position: 78.2
GC content: 35.35
Gene sequence:
>1788_bases GTGAGTTTAATTGATTTAGCAAGAGCCAAGGGATATACAAACGAACAACTAAACAAAAACAACAATAACAACCAACCGAC ACAAACATTAACTTTTGACGGTGGTATATATTCTGTTCCAAGCAATATCGTTAATGGGCAAATTAGCGATATTCGCCTTT TGGGAAATACCCGGACAAACTTATTTAAAAAATTAGACACGATGCCAGCGAATGTGACTTATAACCCTACTACAGACGAA TATGTGTGTAGCGTAGGTGGTACTGGAAACATAATTACTCCAAACATCAATATTAAACCAAATACTGCATATTTAATAAG TTTTGATATTAAATGTAGTGAGGTATATACTCCAGCGAACAAAGCCGAATGCTTTAGAGTTGATGATATTGCTAGTGGTA CTTGGATAGATGGTTTATTTTCACAAATTGGTACATCTTATGCTAGGTTAACTTTTTCTATTCCAAGCACTAATACTGCA ACCGGTTTAAGATTTGTGTTACGAAATGCAGTTAACAAAAGTTTAACAATCAAAAATATAATGCTCGAAGAAGGAACAGA ATTAAAGCCTTACATCACTACAGGCACTAAATCTACAGTTAGCAACATTCGGTTAGTTAGTTTTAAAAACTTATTTAACA GATTTCAAAACCTTATTATTGGCTATTACCTAAGCAGCACTGGTAATATATCAGCGTCACCAAGCGGTGAAAATCAATTT GTTTCAGACTATATAAAAGTAGATAGTAGTACAGCGTATATTATTTCAAATACCGCCGCCGAGGAAAATTATATTCGTAT TGGCTACTATGATACAAATAAAAATTTTATTAAAAGAGATATTACAGGAACAAAAGCAACAGAATTTACATTTACAACTC CAAGCACTGCTCAATATATTCGTGTATCACAAGAAGTTGGGACGGAAAAAACGACACTACTTGAAAAAGGCACAGTAAAG ACGGAATTAAAAGAATCAATGGTTTACATTTCCGCAGGTGGCGAACTCCGAAGTGTCGGTATCGCTAAAGATGAAGTTAA TGCAACCAGTGGTGAGAAGGTTCAGAGGGTTAGTGATGATAAATTATTAACTCAAATATCATCTTATTTAGATGGAACTG TAGCAAGAAGAAATATAATTGACACAACGGGTTTAGCATTACCGGCAGATAACTCAACTTTACCACAAACAACAAGATTA ATTGATAAAAACACTGGTAGTGCTTTAGACAGAACAGACAGTGTTAATTGGGACACTACAGGAGGAATAGGGAAATACTA CATTTCGTCAACGGGTGTATTATATATAATATCTGCTGTTGGTGTATCTCCGGCAATCAATCATGCACTAACTTATCAAT TAATGCAAAATACAGTTACAAAAATACCACAACAACCACCTTTACAGGTATTTGAAGGTGGTTCTATTTATGTCGAGCCT GTTGGTGATTTGGCTGAAACTACATTACCTACAGTAGAAATTACTGCACCTATTGGACAATCAAACAACTTTGGTGTTGC TACACATGATTATCAAGTCGCCGCCGCAGATTGGGTTTTGAGTGGTTCGGAAGCTAAAAGTACACTGCTAATTGCTACTA ATGCAGGTGGCACAGCAAATATAATTGCACCTGATAGACCGGGACTTTTTTATGTAGTAAATAACATATCTGGTCAAACA ATGACTATTAAAAAATCTGGTGGTACAGGGGTTGCTATAGCAACAGGTAAGACAGCACTTGTTATGCATAACGGTACTAA TTTTATAAAAATTACTGGGGAGGTATAA
Upstream 100 bases:
>100_bases AGACCAGAAGCAAATACCGTACCTGTTGGTTGTGTATTTATGGCCGTTCAAACCCAAGAGATGTGGCAATCAGACGGTAC TAATTGGGTGGTGATTTAAG
Downstream 100 bases:
>100_bases GGTTATGATTATTGATAAGAAAATTACATTTGAGGTAACAGAAATAACCGACAAAGGAAGTACGGTATTGCTAAAATTTA TTCCAACCATGCCGGAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MSLIDLARAKGYTNEQLNKNNNNNQPTQTLTFDGGIYSVPSNIVNGQISDIRLLGNTRTNLFKKLDTMPANVTYNPTTDE YVCSVGGTGNIITPNINIKPNTAYLISFDIKCSEVYTPANKAECFRVDDIASGTWIDGLFSQIGTSYARLTFSIPSTNTA TGLRFVLRNAVNKSLTIKNIMLEEGTELKPYITTGTKSTVSNIRLVSFKNLFNRFQNLIIGYYLSSTGNISASPSGENQF VSDYIKVDSSTAYIISNTAAEENYIRIGYYDTNKNFIKRDITGTKATEFTFTTPSTAQYIRVSQEVGTEKTTLLEKGTVK TELKESMVYISAGGELRSVGIAKDEVNATSGEKVQRVSDDKLLTQISSYLDGTVARRNIIDTTGLALPADNSTLPQTTRL IDKNTGSALDRTDSVNWDTTGGIGKYYISSTGVLYIISAVGVSPAINHALTYQLMQNTVTKIPQQPPLQVFEGGSIYVEP VGDLAETTLPTVEITAPIGQSNNFGVATHDYQVAAADWVLSGSEAKSTLLIATNAGGTANIIAPDRPGLFYVVNNISGQT MTIKKSGGTGVAIATGKTALVMHNGTNFIKITGEV
Sequences:
>Translated_595_residues MSLIDLARAKGYTNEQLNKNNNNNQPTQTLTFDGGIYSVPSNIVNGQISDIRLLGNTRTNLFKKLDTMPANVTYNPTTDE YVCSVGGTGNIITPNINIKPNTAYLISFDIKCSEVYTPANKAECFRVDDIASGTWIDGLFSQIGTSYARLTFSIPSTNTA TGLRFVLRNAVNKSLTIKNIMLEEGTELKPYITTGTKSTVSNIRLVSFKNLFNRFQNLIIGYYLSSTGNISASPSGENQF VSDYIKVDSSTAYIISNTAAEENYIRIGYYDTNKNFIKRDITGTKATEFTFTTPSTAQYIRVSQEVGTEKTTLLEKGTVK TELKESMVYISAGGELRSVGIAKDEVNATSGEKVQRVSDDKLLTQISSYLDGTVARRNIIDTTGLALPADNSTLPQTTRL IDKNTGSALDRTDSVNWDTTGGIGKYYISSTGVLYIISAVGVSPAINHALTYQLMQNTVTKIPQQPPLQVFEGGSIYVEP VGDLAETTLPTVEITAPIGQSNNFGVATHDYQVAAADWVLSGSEAKSTLLIATNAGGTANIIAPDRPGLFYVVNNISGQT MTIKKSGGTGVAIATGKTALVMHNGTNFIKITGEV >Mature_594_residues SLIDLARAKGYTNEQLNKNNNNNQPTQTLTFDGGIYSVPSNIVNGQISDIRLLGNTRTNLFKKLDTMPANVTYNPTTDEY VCSVGGTGNIITPNINIKPNTAYLISFDIKCSEVYTPANKAECFRVDDIASGTWIDGLFSQIGTSYARLTFSIPSTNTAT GLRFVLRNAVNKSLTIKNIMLEEGTELKPYITTGTKSTVSNIRLVSFKNLFNRFQNLIIGYYLSSTGNISASPSGENQFV SDYIKVDSSTAYIISNTAAEENYIRIGYYDTNKNFIKRDITGTKATEFTFTTPSTAQYIRVSQEVGTEKTTLLEKGTVKT ELKESMVYISAGGELRSVGIAKDEVNATSGEKVQRVSDDKLLTQISSYLDGTVARRNIIDTTGLALPADNSTLPQTTRLI DKNTGSALDRTDSVNWDTTGGIGKYYISSTGVLYIISAVGVSPAINHALTYQLMQNTVTKIPQQPPLQVFEGGSIYVEPV GDLAETTLPTVEITAPIGQSNNFGVATHDYQVAAADWVLSGSEAKSTLLIATNAGGTANIIAPDRPGLFYVVNNISGQTM TIKKSGGTGVAIATGKTALVMHNGTNFIKITGEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64212; Mature: 64081
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDLARAKGYTNEQLNKNNNNNQPTQTLTFDGGIYSVPSNIVNGQISDIRLLGNTRTN CCHHHHHHHCCCCCHHCCCCCCCCCCCEEEEECCCEEECCHHHCCCCCEEEEEECCCHHH LFKKLDTMPANVTYNPTTDEYVCSVGGTGNIITPNINIKPNTAYLISFDIKCSEVYTPAN HHHHHHCCCCCEEECCCCCCEEEECCCCCCEECCCEEECCCEEEEEEEEEEEEEEECCCC KAECFRVDDIASGTWIDGLFSQIGTSYARLTFSIPSTNTATGLRFVLRNAVNKSLTIKNI CCCEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE MLEEGTELKPYITTGTKSTVSNIRLVSFKNLFNRFQNLIIGYYLSSTGNISASPSGENQF EECCCCCCCCEEECCCCHHHHCEEEEHHHHHHHHHHHHEEEEEECCCCCEECCCCCCCHH VSDYIKVDSSTAYIISNTAAEENYIRIGYYDTNKNFIKRDITGTKATEFTFTTPSTAQYI HHHHEEECCCEEEEEECCCCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEECCCCCEEE RVSQEVGTEKTTLLEKGTVKTELKESMVYISAGGELRSVGIAKDEVNATSGEKVQRVSDD EEHHHHCCCHHEEEECCCCHHHHCCCEEEEECCCCEEEECCCHHCCCCCCCCHHHHCCHH KLLTQISSYLDGTVARRNIIDTTGLALPADNSTLPQTTRLIDKNTGSALDRTDSVNWDTT HHHHHHHHHHCCHHHHCCCCCCCCEEECCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCC GGIGKYYISSTGVLYIISAVGVSPAINHALTYQLMQNTVTKIPQQPPLQVFEGGSIYVEP CCCEEEEEECCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEE VGDLAETTLPTVEITAPIGQSNNFGVATHDYQVAAADWVLSGSEAKSTLLIATNAGGTAN CCCHHHHCCCEEEEEECCCCCCCCCEEECCEEEEEEEEEEECCCCCEEEEEEECCCCEEE IIAPDRPGLFYVVNNISGQTMTIKKSGGTGVAIATGKTALVMHNGTNFIKITGEV EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCEEEEEECCCCEEEEEECC >Mature Secondary Structure SLIDLARAKGYTNEQLNKNNNNNQPTQTLTFDGGIYSVPSNIVNGQISDIRLLGNTRTN CHHHHHHHCCCCCHHCCCCCCCCCCCEEEEECCCEEECCHHHCCCCCEEEEEECCCHHH LFKKLDTMPANVTYNPTTDEYVCSVGGTGNIITPNINIKPNTAYLISFDIKCSEVYTPAN HHHHHHCCCCCEEECCCCCCEEEECCCCCCEECCCEEECCCEEEEEEEEEEEEEEECCCC KAECFRVDDIASGTWIDGLFSQIGTSYARLTFSIPSTNTATGLRFVLRNAVNKSLTIKNI CCCEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEE MLEEGTELKPYITTGTKSTVSNIRLVSFKNLFNRFQNLIIGYYLSSTGNISASPSGENQF EECCCCCCCCEEECCCCHHHHCEEEEHHHHHHHHHHHHEEEEEECCCCCEECCCCCCCHH VSDYIKVDSSTAYIISNTAAEENYIRIGYYDTNKNFIKRDITGTKATEFTFTTPSTAQYI HHHHEEECCCEEEEEECCCCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEECCCCCEEE RVSQEVGTEKTTLLEKGTVKTELKESMVYISAGGELRSVGIAKDEVNATSGEKVQRVSDD EEHHHHCCCHHEEEECCCCHHHHCCCEEEEECCCCEEEECCCHHCCCCCCCCHHHHCCHH KLLTQISSYLDGTVARRNIIDTTGLALPADNSTLPQTTRLIDKNTGSALDRTDSVNWDTT HHHHHHHHHHCCHHHHCCCCCCCCEEECCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCC GGIGKYYISSTGVLYIISAVGVSPAINHALTYQLMQNTVTKIPQQPPLQVFEGGSIYVEP CCCEEEEEECCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEE VGDLAETTLPTVEITAPIGQSNNFGVATHDYQVAAADWVLSGSEAKSTLLIATNAGGTAN CCCHHHHCCCEEEEEECCCCCCCCCEEECCEEEEEEEEEEECCCCCEEEEEEECCCCEEE IIAPDRPGLFYVVNNISGQTMTIKKSGGTGVAIATGKTALVMHNGTNFIKITGEV EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA