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The map label for this gene is 134300404

Identifier: 134300404

GI number: 134300404

Start: 2794921

End: 2795727

Strand: Reverse

Name: 134300404

Synonym: Dred_2565

Alternate gene names: NA

Gene position: 2795727-2794921 (Counterclockwise)

Preceding gene: 134300405

Following gene: 134300403

Centisome position: 77.48

GC content: 42.63

Gene sequence:

>807_bases
ATGCCAAACATGCTTAGCGAGAGGCTACCAACAAAGACTTGGGTAAGAGAGATCGATGCCCGAGTGAAACTGGTAGCCGT
TATTTTATATATTTTCACTGCCACGACATTGCGGGATCAACATCTATTGTTAACTGCGGATATGTTCATGCTAGGTCTCT
TAATGGTTGCCGGGATTTCGCCAACTTATCTGGCTAAGAAAGTAATGTTGATTCTACCCTTTGGTGGTGTTATGGTTTCG
ATTATTCCCTTTGTAATACCGGGAGAACCGTTGCTGACCATGCAGTTGGGGAATTTTACATTAATTGCTTCCAGACAGGG
CTGGGAGGCCGCAGTTCTTCCTTGCTTTCGTATGGCAACTGCTTTTCTAGGTATGGTTTTTCTATCGGCCAGTATCACGC
TAAAGGATCTTCTACATGCATTAAATCACATGAAGGTTCCTAGAATCTTTATTGTATTAATGGATTTTACCATACGCTAT
ATTGCTGTGACATTGGATAAGTTAGATCGTATGCAAACTGCCCGGGCGGCCAGGGGGTTTACCCAGGGTCGAAATCTTTG
GCACCTTCATACAATAAAAACACTTGGCACCACTGTTGCTATTCTTTTTCTGCGTTCCTATGAGCGGGCTGAAAGAATTT
ATTTAGCCATGCTTGCCCGGGGGTATACTGGTAAATTTCATTGTTGCGGGCATTGCCATCGCGTCAAAAAAATAGACTTT
GGCTTCGGAGTAGGAGTTATTTCTGCTTCTTGGACAATTAAGTTTTTTGATATGGGAGGGTACCAATGGATTATGCAATT
GAAATAA

Upstream 100 bases:

>100_bases
CACCGGTGTATTGTTAACCTTTGGATTCATGATGGGAATGAAGAAACTCCTAATTCATAAACAGAACCCTTCTGCCTAAT
AAAGCCACGGGGGTTAGCCC

Downstream 100 bases:

>100_bases
AGGATTTGTCCTTCTACTATAAAGATGGCACTCGGGCATTGGACAAGTTATCCTTAGGCTTTGAGAAAGGAAAGAAAATA
GCTATTTTAGGACCTAATGG

Product: cobalt ABC transporter, inner membrane subunit CbiQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPNMLSERLPTKTWVREIDARVKLVAVILYIFTATTLRDQHLLLTADMFMLGLLMVAGISPTYLAKKVMLILPFGGVMVS
IIPFVIPGEPLLTMQLGNFTLIASRQGWEAAVLPCFRMATAFLGMVFLSASITLKDLLHALNHMKVPRIFIVLMDFTIRY
IAVTLDKLDRMQTARAARGFTQGRNLWHLHTIKTLGTTVAILFLRSYERAERIYLAMLARGYTGKFHCCGHCHRVKKIDF
GFGVGVISASWTIKFFDMGGYQWIMQLK

Sequences:

>Translated_268_residues
MPNMLSERLPTKTWVREIDARVKLVAVILYIFTATTLRDQHLLLTADMFMLGLLMVAGISPTYLAKKVMLILPFGGVMVS
IIPFVIPGEPLLTMQLGNFTLIASRQGWEAAVLPCFRMATAFLGMVFLSASITLKDLLHALNHMKVPRIFIVLMDFTIRY
IAVTLDKLDRMQTARAARGFTQGRNLWHLHTIKTLGTTVAILFLRSYERAERIYLAMLARGYTGKFHCCGHCHRVKKIDF
GFGVGVISASWTIKFFDMGGYQWIMQLK
>Mature_267_residues
PNMLSERLPTKTWVREIDARVKLVAVILYIFTATTLRDQHLLLTADMFMLGLLMVAGISPTYLAKKVMLILPFGGVMVSI
IPFVIPGEPLLTMQLGNFTLIASRQGWEAAVLPCFRMATAFLGMVFLSASITLKDLLHALNHMKVPRIFIVLMDFTIRYI
AVTLDKLDRMQTARAARGFTQGRNLWHLHTIKTLGTTVAILFLRSYERAERIYLAMLARGYTGKFHCCGHCHRVKKIDFG
FGVGVISASWTIKFFDMGGYQWIMQLK

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 30351; Mature: 30220

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNMLSERLPTKTWVREIDARVKLVAVILYIFTATTLRDQHLLLTADMFMLGLLMVAGIS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCC
PTYLAKKVMLILPFGGVMVSIIPFVIPGEPLLTMQLGNFTLIASRQGWEAAVLPCFRMAT
HHHHHHHHHEEECCCHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHH
AFLGMVFLSASITLKDLLHALNHMKVPRIFIVLMDFTIRYIAVTLDKLDRMQTARAARGF
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TQGRNLWHLHTIKTLGTTVAILFLRSYERAERIYLAMLARGYTGKFHCCGHCHRVKKIDF
HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHEEECC
GFGVGVISASWTIKFFDMGGYQWIMQLK
CCCEEEEEEEEEEEEEECCCEEEEEEEC
>Mature Secondary Structure 
PNMLSERLPTKTWVREIDARVKLVAVILYIFTATTLRDQHLLLTADMFMLGLLMVAGIS
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCC
PTYLAKKVMLILPFGGVMVSIIPFVIPGEPLLTMQLGNFTLIASRQGWEAAVLPCFRMAT
HHHHHHHHHEEECCCHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHH
AFLGMVFLSASITLKDLLHALNHMKVPRIFIVLMDFTIRYIAVTLDKLDRMQTARAARGF
HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TQGRNLWHLHTIKTLGTTVAILFLRSYERAERIYLAMLARGYTGKFHCCGHCHRVKKIDF
HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHEEECC
GFGVGVISASWTIKFFDMGGYQWIMQLK
CCCEEEEEEEEEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]