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The map label for this gene is ygeR [H]

Identifier: 134300379

GI number: 134300379

Start: 2763961

End: 2764875

Strand: Reverse

Name: ygeR [H]

Synonym: Dred_2540

Alternate gene names: 134300379

Gene position: 2764875-2763961 (Counterclockwise)

Preceding gene: 134300380

Following gene: 134300378

Centisome position: 76.63

GC content: 42.4

Gene sequence:

>915_bases
GTGAAAATAAGAAGGTTCAGCTTTGACTGGTATAAAAAGAAAAAAAGAGACCCTTTAAACAATTACTACAGTTACAATAG
CAACAATGACGATTGGGCCAGTATGCTCTATTCCGGAGATAATTGGAAACGTAAAAAACAAAGTAGTAGGGGTTGGAAAA
CCTTCTACCGAATTGTCGCTGCACTGGGAATATTTGCAATATTATTGGTGATTAAGGAGTCTCCTCATCCATGGAGCCAG
CAGGCCAGGGAGAATCTAAAGGTTGCCTTGACCACTGAGTGGAATGTAGTACCTGTGCTGGATAAGGCGGTTGCCTTTGG
CTTGCAGACGGTAAATATGGACTGGCCGTTGTTTCATGAATTATCCAATCCTGTTTTACCCGCTACCACAGAACCTGTAC
AGGATGGGGTTTGGGCCATTCCTGTATCAGGTCGTGTTGTACAGGAGTTTGGTTGGTCAAAGAGTACTGAAGATAATCTG
GAACGTTTTAACCCAGGAATTGATATCAGTGCACCTGTGGGTTCACCGGTAAAGGTTGTGCAGCCGGGGAAAGTTAGTCG
TATTGGATATGATCGGGCCTATGGGGAATTTGTATTGATTGAACACCAAAAAGGAGGATATACTCTTTATGCAGGTTTAA
ATGATATTTCTGTCCTAGAAGATGATCCGGTGCAGGAAGGTCAGGTATTAGGGACAATTGCGGAACAAAGCCAAGGAGAT
CCCGTACTTCACTTTGAGGTGAGGGAAAATGACAAATTGGTAGACCCCTTAAAAAAGATCAATATGACCAATACAGTAAC
ACCAGAAGATAAAGGAGAGCAAAACAAACAGGAGCTAAAAGAAGAGTCCACGGATGATCAATCCAAGAATACCAGCAACA
AAACGAATAGAGAACAGGAAACTGATAAGCAATGA

Upstream 100 bases:

>100_bases
AAGAAATACCCATAAGCAAAACAGGCTTGTCATATTTGTCCCTCTAATTAAATATATTGTACTAGTTGCACGAGCAATAG
TTTCCTAGGAGGGATTTAAG

Downstream 100 bases:

>100_bases
AAGTAGGTCACCTATGGGGGATCGAAATCCACTTTAACCTGTTGTTCCTTGTTCTTCTAGGACTATATTTTGTAGCTGGG
GTGTTGGAAAAGGGTTTAAT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKIRRFSFDWYKKKKRDPLNNYYSYNSNNDDWASMLYSGDNWKRKKQSSRGWKTFYRIVAALGIFAILLVIKESPHPWSQ
QARENLKVALTTEWNVVPVLDKAVAFGLQTVNMDWPLFHELSNPVLPATTEPVQDGVWAIPVSGRVVQEFGWSKSTEDNL
ERFNPGIDISAPVGSPVKVVQPGKVSRIGYDRAYGEFVLIEHQKGGYTLYAGLNDISVLEDDPVQEGQVLGTIAEQSQGD
PVLHFEVRENDKLVDPLKKINMTNTVTPEDKGEQNKQELKEESTDDQSKNTSNKTNREQETDKQ

Sequences:

>Translated_304_residues
MKIRRFSFDWYKKKKRDPLNNYYSYNSNNDDWASMLYSGDNWKRKKQSSRGWKTFYRIVAALGIFAILLVIKESPHPWSQ
QARENLKVALTTEWNVVPVLDKAVAFGLQTVNMDWPLFHELSNPVLPATTEPVQDGVWAIPVSGRVVQEFGWSKSTEDNL
ERFNPGIDISAPVGSPVKVVQPGKVSRIGYDRAYGEFVLIEHQKGGYTLYAGLNDISVLEDDPVQEGQVLGTIAEQSQGD
PVLHFEVRENDKLVDPLKKINMTNTVTPEDKGEQNKQELKEESTDDQSKNTSNKTNREQETDKQ
>Mature_304_residues
MKIRRFSFDWYKKKKRDPLNNYYSYNSNNDDWASMLYSGDNWKRKKQSSRGWKTFYRIVAALGIFAILLVIKESPHPWSQ
QARENLKVALTTEWNVVPVLDKAVAFGLQTVNMDWPLFHELSNPVLPATTEPVQDGVWAIPVSGRVVQEFGWSKSTEDNL
ERFNPGIDISAPVGSPVKVVQPGKVSRIGYDRAYGEFVLIEHQKGGYTLYAGLNDISVLEDDPVQEGQVLGTIAEQSQGD
PVLHFEVRENDKLVDPLKKINMTNTVTPEDKGEQNKQELKEESTDDQSKNTSNKTNREQETDKQ

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082174, Length=128, Percent_Identity=33.59375, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789099, Length=124, Percent_Identity=31.4516129032258, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 34637; Mature: 34637

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRRFSFDWYKKKKRDPLNNYYSYNSNNDDWASMLYSGDNWKRKKQSSRGWKTFYRIVA
CCEEECCCHHHHHHCCCCCHHCCCCCCCCCHHHHHEECCCCHHHHHHCCCHHHHHHHHHH
ALGIFAILLVIKESPHPWSQQARENLKVALTTEWNVVPVLDKAVAFGLQTVNMDWPLFHE
HHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCEEHHHHHHHHHCEEEECCCCHHHHH
LSNPVLPATTEPVQDGVWAIPVSGRVVQEFGWSKSTEDNLERFNPGIDISAPVGSPVKVV
HCCCCCCCCCCHHHCCEEEEECCCHHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCEEEE
QPGKVSRIGYDRAYGEFVLIEHQKGGYTLYAGLNDISVLEDDPVQEGQVLGTIAEQSQGD
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEECCCCCCCCCCEEEEHHHCCCCC
PVLHFEVRENDKLVDPLKKINMTNTVTPEDKGEQNKQELKEESTDDQSKNTSNKTNREQE
CEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHH
TDKQ
CCCC
>Mature Secondary Structure
MKIRRFSFDWYKKKKRDPLNNYYSYNSNNDDWASMLYSGDNWKRKKQSSRGWKTFYRIVA
CCEEECCCHHHHHHCCCCCHHCCCCCCCCCHHHHHEECCCCHHHHHHCCCHHHHHHHHHH
ALGIFAILLVIKESPHPWSQQARENLKVALTTEWNVVPVLDKAVAFGLQTVNMDWPLFHE
HHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECCCEEHHHHHHHHHCEEEECCCCHHHHH
LSNPVLPATTEPVQDGVWAIPVSGRVVQEFGWSKSTEDNLERFNPGIDISAPVGSPVKVV
HCCCCCCCCCCHHHCCEEEEECCCHHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCEEEE
QPGKVSRIGYDRAYGEFVLIEHQKGGYTLYAGLNDISVLEDDPVQEGQVLGTIAEQSQGD
CCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEECCCCCCCCCCEEEEHHHCCCCC
PVLHFEVRENDKLVDPLKKINMTNTVTPEDKGEQNKQELKEESTDDQSKNTSNKTNREQE
CEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHH
TDKQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]