| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is sfsA
Identifier: 134300370
GI number: 134300370
Start: 2755075
End: 2755794
Strand: Reverse
Name: sfsA
Synonym: Dred_2531
Alternate gene names: 134300370
Gene position: 2755794-2755075 (Counterclockwise)
Preceding gene: 134300371
Following gene: 134300369
Centisome position: 76.38
GC content: 41.81
Gene sequence:
>720_bases TTGAATGGTCTGAATAACCATGCCTCTAACATAGAAATTGTATTACCTGAACTGATTGAGGCAGTATTTGTGGAAAGAGT AAATCGTTTTGTAGGGATGGTTCAAGTGGCGGGGCATATTTGCCCCGCCCATGTTCCAAGTTCCGGAAGAATGCGAGAAT TACTTTTTCCCGGCAATATTGTTTATATATCCCCCATGCCCAAGGGAAGAAAAACACAATATCGTATTCATTTGGCTAAA TACGATGATATAATGGTTTCAGTGGATTCCTTACTTCCAAACAGATTAATGTACAAGGTTTTGTCTGAAGGGGCTATCAG TCACTTTGCTATGTATGAAGAGGTAAAAAAGGAAGTAGGTTACGGTGAAAGTCGCTTTGATATTTATCTTAAGGGAGAAG CAGGCCGTTGCTTTATTGAAGTAAAATCGGTAACTCTGGTGGACGAAGGGGTTGCGAAGTTTCCAGATGCTCCATCGGAA CGGGGTTCCAAGCACCTTTCCGAACTAACTAGAGCTGTGGGTGAAGGGTACCGATCCGCGGTTATTTTTATCATCCAAAG GGACGATGCAAGGAGCTTTTCGCCCAATAGTATCACTGATCCGGTTTTTAGCCAAACACTTTCCCAAGCAATTGAAGCAG GAGTTGAAATATATGCTTTAGCCTGTGATGTGTCGCTGAATACAGTTAGGCTTAAGAAATATATTCCTGTTCAGTTATAG
Upstream 100 bases:
>100_bases GAACGGTTGCAAAGAATTATGAAAATGATGGGATTAGAGAATGGGCTTGTTGAGGCTGGAGTTAAAGTAGGCGATATTGT TCGAATTGGAGACTGGGAAT
Downstream 100 bases:
>100_bases AGAAAAGCAAAGGGGGATTTTCATGAAAGAAGATGTTAAGTTTAACGACCACCTAAGGGAACTATTAGAACAGCTTCCGA AAGGTGCATTTTTAACGGTG
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNGLNNHASNIEIVLPELIEAVFVERVNRFVGMVQVAGHICPAHVPSSGRMRELLFPGNIVYISPMPKGRKTQYRIHLAK YDDIMVSVDSLLPNRLMYKVLSEGAISHFAMYEEVKKEVGYGESRFDIYLKGEAGRCFIEVKSVTLVDEGVAKFPDAPSE RGSKHLSELTRAVGEGYRSAVIFIIQRDDARSFSPNSITDPVFSQTLSQAIEAGVEIYALACDVSLNTVRLKKYIPVQL
Sequences:
>Translated_239_residues MNGLNNHASNIEIVLPELIEAVFVERVNRFVGMVQVAGHICPAHVPSSGRMRELLFPGNIVYISPMPKGRKTQYRIHLAK YDDIMVSVDSLLPNRLMYKVLSEGAISHFAMYEEVKKEVGYGESRFDIYLKGEAGRCFIEVKSVTLVDEGVAKFPDAPSE RGSKHLSELTRAVGEGYRSAVIFIIQRDDARSFSPNSITDPVFSQTLSQAIEAGVEIYALACDVSLNTVRLKKYIPVQL >Mature_239_residues MNGLNNHASNIEIVLPELIEAVFVERVNRFVGMVQVAGHICPAHVPSSGRMRELLFPGNIVYISPMPKGRKTQYRIHLAK YDDIMVSVDSLLPNRLMYKVLSEGAISHFAMYEEVKKEVGYGESRFDIYLKGEAGRCFIEVKSVTLVDEGVAKFPDAPSE RGSKHLSELTRAVGEGYRSAVIFIIQRDDARSFSPNSITDPVFSQTLSQAIEAGVEIYALACDVSLNTVRLKKYIPVQL
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family
Homologues:
Organism=Escherichia coli, GI1786340, Length=230, Percent_Identity=34.7826086956522, Blast_Score=126, Evalue=1e-30,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): SFSA_DESRM (A4J7I8)
Other databases:
- EMBL: CP000612 - RefSeq: YP_001113866.1 - STRING: A4J7I8 - GeneID: 4955757 - GenomeReviews: CP000612_GR - KEGG: drm:Dred_2531 - eggNOG: COG1489 - HOGENOM: HBG655520 - OMA: NTGSMLN - PhylomeDB: A4J7I8 - BioCyc: DRED349161:DRED_2531-MONOMER - HAMAP: MF_00095 - InterPro: IPR005224 - TIGRFAMs: TIGR00230
Pfam domain/function: PF03749 SfsA
EC number: NA
Molecular weight: Translated: 26624; Mature: 26624
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLNNHASNIEIVLPELIEAVFVERVNRFVGMVQVAGHICPAHVPSSGRMRELLFPGNI CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCE VYISPMPKGRKTQYRIHLAKYDDIMVSVDSLLPNRLMYKVLSEGAISHFAMYEEVKKEVG EEECCCCCCCCEEEEEEEEECCCCEEEHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHC YGESRFDIYLKGEAGRCFIEVKSVTLVDEGVAKFPDAPSERGSKHLSELTRAVGEGYRSA CCCCEEEEEEECCCCEEEEEEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEE VIFIIQRDDARSFSPNSITDPVFSQTLSQAIEAGVEIYALACDVSLNTVRLKKYIPVQL EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEECEEEEEEECCCCC >Mature Secondary Structure MNGLNNHASNIEIVLPELIEAVFVERVNRFVGMVQVAGHICPAHVPSSGRMRELLFPGNI CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCE VYISPMPKGRKTQYRIHLAKYDDIMVSVDSLLPNRLMYKVLSEGAISHFAMYEEVKKEVG EEECCCCCCCCEEEEEEEEECCCCEEEHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHC YGESRFDIYLKGEAGRCFIEVKSVTLVDEGVAKFPDAPSERGSKHLSELTRAVGEGYRSA CCCCEEEEEEECCCCEEEEEEEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEE VIFIIQRDDARSFSPNSITDPVFSQTLSQAIEAGVEIYALACDVSLNTVRLKKYIPVQL EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEECEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA