| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300359
Identifier: 134300359
GI number: 134300359
Start: 2739895
End: 2740404
Strand: Reverse
Name: 134300359
Synonym: Dred_2520
Alternate gene names: NA
Gene position: 2740404-2739895 (Counterclockwise)
Preceding gene: 134300361
Following gene: 134300358
Centisome position: 75.95
GC content: 43.53
Gene sequence:
>510_bases ATGGAAAATTTGTGGGCCCCCTGGCGATCTATTTATATCGGAAAACCCCAAACAGGGTGCATCTTTTGTGAAAAGCTAAA CTCGGATCAGGACGAAGAAAATCTTGTGATTTACCGGGGAGATAAGACCTTTGTTATTATGAATTTGTACCCTTATAATA ACGGACACCTCCTGATTGCCCCCAAAAGACATGTGGGAGATATTACAGAGCTTACTGATGAAGAATTGCTCGAATTACAT AAAATGACACAATTCATGGTGCAAGCCCTTCGGAGAGCCTTTGGTAACCCACATGGTTTTAATATTGGCATCAATCTTGG TAAGGTAGCCGGGGCTGGGATACCCGGGCATCTTCATGTTCACATTGTACCTCGCTGGGACGGGGATGCTAATTTCATGG CTGTCATTGGAGATACACGGGTTATTTCTGAGGGGTTGCAGCGTACCTATGAAAAAATAACCAGAGCCATTACGGCATTA AAAAGCGAAGGATCGACCAATGGTAATTAA
Upstream 100 bases:
>100_bases AACAGAATAATCCTTAATAGAACAAGATCTTTTTATTTAGAAGGTATTTAACAAATAAAAAAGAAAAATATGTTTTAAAG AAGAAACGGGAGATGATAGT
Downstream 100 bases:
>100_bases TATTTAGTAAAGCTATTTATCATGTCTGGTTGCTTTTTGATAAAATTACCATTAAAATGACGTTAGTTAAAGGTGAAAGG ATATTACACATGCAAGAAAT
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: ATP adenylyltransferase; Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase; AP,A phosphorylase [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MENLWAPWRSIYIGKPQTGCIFCEKLNSDQDEENLVIYRGDKTFVIMNLYPYNNGHLLIAPKRHVGDITELTDEELLELH KMTQFMVQALRRAFGNPHGFNIGINLGKVAGAGIPGHLHVHIVPRWDGDANFMAVIGDTRVISEGLQRTYEKITRAITAL KSEGSTNGN
Sequences:
>Translated_169_residues MENLWAPWRSIYIGKPQTGCIFCEKLNSDQDEENLVIYRGDKTFVIMNLYPYNNGHLLIAPKRHVGDITELTDEELLELH KMTQFMVQALRRAFGNPHGFNIGINLGKVAGAGIPGHLHVHIVPRWDGDANFMAVIGDTRVISEGLQRTYEKITRAITAL KSEGSTNGN >Mature_169_residues MENLWAPWRSIYIGKPQTGCIFCEKLNSDQDEENLVIYRGDKTFVIMNLYPYNNGHLLIAPKRHVGDITELTDEELLELH KMTQFMVQALRRAFGNPHGFNIGINLGKVAGAGIPGHLHVHIVPRWDGDANFMAVIGDTRVISEGLQRTYEKITRAITAL KSEGSTNGN
Specific function: Catabolizes diadenosine 5',5'''-P1,P4-tetraphosphate (Ap4A) into ADP and ATP. It does not catalyze the reverse phosphorolysis reaction. The optimum substrates are dinucleoside polyphosphates containing four or five phosphate residues [H]
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17556280, Length=94, Percent_Identity=39.3617021276596, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: =2.7.7.53 [H]
Molecular weight: Translated: 18974; Mature: 18974
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLWAPWRSIYIGKPQTGCIFCEKLNSDQDEENLVIYRGDKTFVIMNLYPYNNGHLLIA CCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEE PKRHVGDITELTDEELLELHKMTQFMVQALRRAFGNPHGFNIGINLGKVAGAGIPGHLHV CCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEE HIVPRWDGDANFMAVIGDTRVISEGLQRTYEKITRAITALKSEGSTNGN EEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MENLWAPWRSIYIGKPQTGCIFCEKLNSDQDEENLVIYRGDKTFVIMNLYPYNNGHLLIA CCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEEE PKRHVGDITELTDEELLELHKMTQFMVQALRRAFGNPHGFNIGINLGKVAGAGIPGHLHV CCHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEE HIVPRWDGDANFMAVIGDTRVISEGLQRTYEKITRAITALKSEGSTNGN EEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036 [H]