| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is yqeL [H]
Identifier: 134300355
GI number: 134300355
Start: 2737760
End: 2738116
Strand: Reverse
Name: yqeL [H]
Synonym: Dred_2516
Alternate gene names: 134300355
Gene position: 2738116-2737760 (Counterclockwise)
Preceding gene: 134300356
Following gene: 134300354
Centisome position: 75.89
GC content: 40.62
Gene sequence:
>357_bases TTGACACTAAGCCCAAAGGAAATTGTTGATATAGCCCACCAAGCAGCTAACGAGAAAAAGGCGCTGGATATTACCGTTTT AGATATCAGTAAAATTTCCATCATCTGTGATTATTTTTTAATCTGTACTGGACGTTCTAGCACCCAGGTACAATCCGTGG CTGAGCATATCGAAGAAAAGCTAAAGGAAGCAGGGGTTAAATTGCTTCGCATGGAGGGTTTTCGAGAGGGTAGTTGGATT TTGTTAGATTATGGTGATATAGTGGTTCATATATTCCAAGAAATGGATAGAAGTTTCTACAACCTAGAAAGGCTTTGGGG AGATGCCAACGTAGTGGAAATGTCTGCTAAGGGGTAA
Upstream 100 bases:
>100_bases AAAGCAAGAAATGCAATTTTAGTTGCAAGGGGTTTCTTTAGAAAATAGTGGAATAGGATATAATAGGGTTAATACCCAAT AAGCATAAGGAGGGGTCTTT
Downstream 100 bases:
>100_bases AAAAACATCCGTTGACATAGTTGGTTGGTGAAATTATAATGTTCATTATATAATATAGAAATAAATATCACTAGAAACGT AGATGGGGAGCAGTAAGTGG
Product: iojap-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTLSPKEIVDIAHQAANEKKALDITVLDISKISIICDYFLICTGRSSTQVQSVAEHIEEKLKEAGVKLLRMEGFREGSWI LLDYGDIVVHIFQEMDRSFYNLERLWGDANVVEMSAKG
Sequences:
>Translated_118_residues MTLSPKEIVDIAHQAANEKKALDITVLDISKISIICDYFLICTGRSSTQVQSVAEHIEEKLKEAGVKLLRMEGFREGSWI LLDYGDIVVHIFQEMDRSFYNLERLWGDANVVEMSAKG >Mature_117_residues TLSPKEIVDIAHQAANEKKALDITVLDISKISIICDYFLICTGRSSTQVQSVAEHIEEKLKEAGVKLLRMEGFREGSWIL LDYGDIVVHIFQEMDRSFYNLERLWGDANVVEMSAKG
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Iojap family [H]
Homologues:
Organism=Escherichia coli, GI87081768, Length=104, Percent_Identity=38.4615384615385, Blast_Score=83, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004394 [H]
Pfam domain/function: PF02410 DUF143 [H]
EC number: NA
Molecular weight: Translated: 13362; Mature: 13230
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSPKEIVDIAHQAANEKKALDITVLDISKISIICDYFLICTGRSSTQVQSVAEHIEEK CCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LKEAGVKLLRMEGFREGSWILLDYGDIVVHIFQEMDRSFYNLERLWGDANVVEMSAKG HHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure TLSPKEIVDIAHQAANEKKALDITVLDISKISIICDYFLICTGRSSTQVQSVAEHIEEK CCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LKEAGVKLLRMEGFREGSWILLDYGDIVVHIFQEMDRSFYNLERLWGDANVVEMSAKG HHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]