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The map label for this gene is yqfO [H]

Identifier: 134300298

GI number: 134300298

Start: 2675265

End: 2676380

Strand: Reverse

Name: yqfO [H]

Synonym: Dred_2459

Alternate gene names: 134300298

Gene position: 2676380-2675265 (Counterclockwise)

Preceding gene: 134300299

Following gene: 134300297

Centisome position: 74.18

GC content: 46.77

Gene sequence:

>1116_bases
ATGTCAACAGCCAGGGAGATTGTTTCAATGCTAGAACAAATCGCCCCACGCCATCTGGCAGAGGAGTGGGATAACAGCGG
CTGGCAGGTGGGAGATCCTGCTGCTGGGGTTAGCAAAGTATTACTAACCCTGGACGTAGATGCTGTAGTAGTGCGGGAAG
CGGTGGAAAAGCAGGTTAACCTGATTATTAGCCATCACCCGCTGTTGATGAAAGGTATTAAAAACATCCGCTTGGATGAA
CCCAAGGGGGAATTGATTGCCCAATTAATTAAAAATAACATTGGGCTTTATGCTGCCCATACCAACTTGGACAGTGCTGC
AGGCGGAGTTAATGAGCAGTTGGCTAAACGACTGGGATTGCAAAATATAGAGGTTCTCCACCCTGCCAAGGGAGAAAAGC
ACTTAAAACTAGTTGTATTTGTACCTGTACAACAGGTGGAAGGGGTGCAGAGGGCCATATCCCAAGCTGGTGCTGGTTGG
ATCGGTAACTATAGTGATTGCACGTTCAGTGTTCAGGGGGAAGGAACCTTTCGTCCACTGGAGGGAACCAATCCCTTTAT
TGGACAGCAGGGACAGTTGGAACAGGTGGCGGAAAGCCGCCTGGAAACCATTGTACCAGCCAGTAAAATCAAAACAGTTC
TCAAAGCTATGCTAGAGGCACATCCCTACGAAGAGGTGGCCTATGATCTGTATCCCTTGGAGAATCAGACCAGCAATGCG
GGCTTAGGAAGAATTGGACATTTAGCAGAAACCCAGAGTTTTGCAGATTTTATCATTGCAGTCAAAGAAGCTTTGGGATT
GGCCTCAGTTAAGGTTGGCGGCAGCATGTGGAAGGATGTACGAAGAATCGCTGTTTGTGGTGGCTCCGGAGCAGAGCTCT
GGCCCATTGCATTTGCCAAAGGGGCCGATGTCTATATAACTGGCGATATTAAGTATCATACTGCCCAAGATATGCTGGCG
TCTGGTTTAAATTTTATTGATGCCGGTCATTTTGCCACCGAGCACGTTATTTTACCGGAGTTACAAAGAATACTGTCCGA
GGCCTGTGTCAAGAAAAATTTGGTTGTAGAATTTATGCTAACAAAACGTCAATCTAACCCTTTCATGTTTTTATAG

Upstream 100 bases:

>100_bases
CTTTGGGTCATGTGCCGTGAGCCATGAGCAAAGGCACTAAGTAAAATATGCCCAAAAGGCCACAGCCTAAAGCTAACGTC
TAATCTGGAGGTGTTAACCG

Downstream 100 bases:

>100_bases
GATAGAGGGCTTATAGCTCTGTATCCTATTATTTTTTGAAATATAAATTTTTCTTGAAAGGCTTGGTGAAAGCTAGCCTT
TCTCATGGAGGAGGTAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSTAREIVSMLEQIAPRHLAEEWDNSGWQVGDPAAGVSKVLLTLDVDAVVVREAVEKQVNLIISHHPLLMKGIKNIRLDE
PKGELIAQLIKNNIGLYAAHTNLDSAAGGVNEQLAKRLGLQNIEVLHPAKGEKHLKLVVFVPVQQVEGVQRAISQAGAGW
IGNYSDCTFSVQGEGTFRPLEGTNPFIGQQGQLEQVAESRLETIVPASKIKTVLKAMLEAHPYEEVAYDLYPLENQTSNA
GLGRIGHLAETQSFADFIIAVKEALGLASVKVGGSMWKDVRRIAVCGGSGAELWPIAFAKGADVYITGDIKYHTAQDMLA
SGLNFIDAGHFATEHVILPELQRILSEACVKKNLVVEFMLTKRQSNPFMFL

Sequences:

>Translated_371_residues
MSTAREIVSMLEQIAPRHLAEEWDNSGWQVGDPAAGVSKVLLTLDVDAVVVREAVEKQVNLIISHHPLLMKGIKNIRLDE
PKGELIAQLIKNNIGLYAAHTNLDSAAGGVNEQLAKRLGLQNIEVLHPAKGEKHLKLVVFVPVQQVEGVQRAISQAGAGW
IGNYSDCTFSVQGEGTFRPLEGTNPFIGQQGQLEQVAESRLETIVPASKIKTVLKAMLEAHPYEEVAYDLYPLENQTSNA
GLGRIGHLAETQSFADFIIAVKEALGLASVKVGGSMWKDVRRIAVCGGSGAELWPIAFAKGADVYITGDIKYHTAQDMLA
SGLNFIDAGHFATEHVILPELQRILSEACVKKNLVVEFMLTKRQSNPFMFL
>Mature_370_residues
STAREIVSMLEQIAPRHLAEEWDNSGWQVGDPAAGVSKVLLTLDVDAVVVREAVEKQVNLIISHHPLLMKGIKNIRLDEP
KGELIAQLIKNNIGLYAAHTNLDSAAGGVNEQLAKRLGLQNIEVLHPAKGEKHLKLVVFVPVQQVEGVQRAISQAGAGWI
GNYSDCTFSVQGEGTFRPLEGTNPFIGQQGQLEQVAESRLETIVPASKIKTVLKAMLEAHPYEEVAYDLYPLENQTSNAG
LGRIGHLAETQSFADFIIAVKEALGLASVKVGGSMWKDVRRIAVCGGSGAELWPIAFAKGADVYITGDIKYHTAQDMLAS
GLNFIDAGHFATEHVILPELQRILSEACVKKNLVVEFMLTKRQSNPFMFL

Specific function: Unknown

COG id: COG3323

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI209862879, Length=371, Percent_Identity=26.9541778975741, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI215272360, Length=371, Percent_Identity=26.9541778975741, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI56605983, Length=371, Percent_Identity=26.9541778975741, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI215272362, Length=131, Percent_Identity=34.3511450381679, Blast_Score=86, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6321217, Length=129, Percent_Identity=32.5581395348837, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19921430, Length=127, Percent_Identity=39.3700787401575, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 40418; Mature: 40287

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAREIVSMLEQIAPRHLAEEWDNSGWQVGDPAAGVSKVLLTLDVDAVVVREAVEKQVN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEECHHHHHHHHHHHHHHH
LIISHHPLLMKGIKNIRLDEPKGELIAQLIKNNIGLYAAHTNLDSAAGGVNEQLAKRLGL
HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHCCCHHHHHHHHHCC
QNIEVLHPAKGEKHLKLVVFVPVQQVEGVQRAISQAGAGWIGNYSDCTFSVQGEGTFRPL
CCEEEECCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC
EGTNPFIGQQGQLEQVAESRLETIVPASKIKTVLKAMLEAHPYEEVAYDLYPLENQTSNA
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCC
GLGRIGHLAETQSFADFIIAVKEALGLASVKVGGSMWKDVRRIAVCGGSGAELWPIAFAK
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHEEECCCCCCEEEEEEEC
GADVYITGDIKYHTAQDMLASGLNFIDAGHFATEHVILPELQRILSEACVKKNLVVEFML
CCCEEEECCEEECHHHHHHHCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TKRQSNPFMFL
HHCCCCCCEEC
>Mature Secondary Structure 
STAREIVSMLEQIAPRHLAEEWDNSGWQVGDPAAGVSKVLLTLDVDAVVVREAVEKQVN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEECHHHHHHHHHHHHHHH
LIISHHPLLMKGIKNIRLDEPKGELIAQLIKNNIGLYAAHTNLDSAAGGVNEQLAKRLGL
HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHCCCHHHHHHHHHCC
QNIEVLHPAKGEKHLKLVVFVPVQQVEGVQRAISQAGAGWIGNYSDCTFSVQGEGTFRPL
CCEEEECCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC
EGTNPFIGQQGQLEQVAESRLETIVPASKIKTVLKAMLEAHPYEEVAYDLYPLENQTSNA
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCC
GLGRIGHLAETQSFADFIIAVKEALGLASVKVGGSMWKDVRRIAVCGGSGAELWPIAFAK
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHEEECCCCCCEEEEEEEC
GADVYITGDIKYHTAQDMLASGLNFIDAGHFATEHVILPELQRILSEACVKKNLVVEFML
CCCEEEECCEEECHHHHHHHCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
TKRQSNPFMFL
HHCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]