| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is ppaX [H]
Identifier: 134300288
GI number: 134300288
Start: 2664192
End: 2664845
Strand: Reverse
Name: ppaX [H]
Synonym: Dred_2449
Alternate gene names: 134300288
Gene position: 2664845-2664192 (Counterclockwise)
Preceding gene: 134300289
Following gene: 134300287
Centisome position: 73.86
GC content: 46.02
Gene sequence:
>654_bases ATGATAAAAACAATACTATTTGATTTGGATGGCACACTCCTGGATTCACTGCCTTTAATTAAGAGGACCTATAAGAGGGT CTTTCAAGAAATGAATATACCCTGGGCTAACGGCGAGGTCATGAAATGTATTGGATTGCCGCTGGTTGATATCGGTAAGA AGTTTGCCGGAGAGGAAAGGCACGCAGAATTTTTTAGTTTATACCAGCAGCATTATGCCATCGAGCACGATGCCATGACA AAAGCCTACCCCGGTACCATGGAAATGCTAGAAGACCTGCACCAAAGAAGTCTTCGCCTGGGCGTGGTTACTTCCAAATC CCGCCGAGTTGCATTGAGAAGCACAGGGTTTTTAGGAATTGATCGCTACATGGATGTTCTGATCGGTGTAGAGGATGTGG ACCGTCATAAGCCTCAGCCAGACCCTATTTTTAAAGCCCTGGAACAAATGCAAGTGCCTGCAGAAGGTGCCGCTTACATC GGGGATAGCCCCTTTGACATTATGTCTGCCAAAGCTGCCGGCGTAACTTCCATCGGCGTTAGCTGGGGAATGGCAGAGGG TGATGAACTCCTGCGCTTTGAACCGGATTATCTTCTAAACCAATGGTCAGATTTATTGTTAGTACTGGAAAATGATACCG AATTAATGGACTAA
Upstream 100 bases:
>100_bases TTTTAGCCGTCAGCCGTAGGCTTGAGGGATAGCTGATGGCATTTCTTGGCTTTTGTGCTTTTTCGTAGTAAAATACCAGG ATAAAGAACGGAGGGGTCTC
Downstream 100 bases:
>100_bases TGAAAAGATCTTTTCATAGTTCCTAATAATGGCCAAAAGTCACCAAGGGGATGAAAAAAACATAACCTATGATAAGCGCG GAAAGTAGGTGTGAGTCATG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MIKTILFDLDGTLLDSLPLIKRTYKRVFQEMNIPWANGEVMKCIGLPLVDIGKKFAGEERHAEFFSLYQQHYAIEHDAMT KAYPGTMEMLEDLHQRSLRLGVVTSKSRRVALRSTGFLGIDRYMDVLIGVEDVDRHKPQPDPIFKALEQMQVPAEGAAYI GDSPFDIMSAKAAGVTSIGVSWGMAEGDELLRFEPDYLLNQWSDLLLVLENDTELMD
Sequences:
>Translated_217_residues MIKTILFDLDGTLLDSLPLIKRTYKRVFQEMNIPWANGEVMKCIGLPLVDIGKKFAGEERHAEFFSLYQQHYAIEHDAMT KAYPGTMEMLEDLHQRSLRLGVVTSKSRRVALRSTGFLGIDRYMDVLIGVEDVDRHKPQPDPIFKALEQMQVPAEGAAYI GDSPFDIMSAKAAGVTSIGVSWGMAEGDELLRFEPDYLLNQWSDLLLVLENDTELMD >Mature_217_residues MIKTILFDLDGTLLDSLPLIKRTYKRVFQEMNIPWANGEVMKCIGLPLVDIGKKFAGEERHAEFFSLYQQHYAIEHDAMT KAYPGTMEMLEDLHQRSLRLGVVTSKSRRVALRSTGFLGIDRYMDVLIGVEDVDRHKPQPDPIFKALEQMQVPAEGAAYI GDSPFDIMSAKAAGVTSIGVSWGMAEGDELLRFEPDYLLNQWSDLLLVLENDTELMD
Specific function: Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=235, Percent_Identity=29.3617021276596, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI87082080, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 24543; Mature: 24543
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTILFDLDGTLLDSLPLIKRTYKRVFQEMNIPWANGEVMKCIGLPLVDIGKKFAGEER CCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHCCCHHHHHHHHCCCHH HAEFFSLYQQHYAIEHDAMTKAYPGTMEMLEDLHQRSLRLGVVTSKSRRVALRSTGFLGI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCEEEECCCCCCHH DRYMDVLIGVEDVDRHKPQPDPIFKALEQMQVPAEGAAYIGDSPFDIMSAKAAGVTSIGV HHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEECCC SWGMAEGDELLRFEPDYLLNQWSDLLLVLENDTELMD CCCCCCCCHHEEECHHHHHHHHHHEEEEEECCHHCCC >Mature Secondary Structure MIKTILFDLDGTLLDSLPLIKRTYKRVFQEMNIPWANGEVMKCIGLPLVDIGKKFAGEER CCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHCCCHHHHHHHHCCCHH HAEFFSLYQQHYAIEHDAMTKAYPGTMEMLEDLHQRSLRLGVVTSKSRRVALRSTGFLGI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCEEEECCCCCCHH DRYMDVLIGVEDVDRHKPQPDPIFKALEQMQVPAEGAAYIGDSPFDIMSAKAAGVTSIGV HHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCEECCC SWGMAEGDELLRFEPDYLLNQWSDLLLVLENDTELMD CCCCCCCCHHEEECHHHHHHHHHHEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]