Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is 134300273

Identifier: 134300273

GI number: 134300273

Start: 2650186

End: 2650539

Strand: Reverse

Name: 134300273

Synonym: Dred_2434

Alternate gene names: NA

Gene position: 2650539-2650186 (Counterclockwise)

Preceding gene: 134300274

Following gene: 134300272

Centisome position: 73.46

GC content: 49.44

Gene sequence:

>354_bases
ATGAAAATCGGCGCCGGTGGTCTGCAATCCATTATCATGAGTGATATGATGCGATCCCTGGAACCCACCGTAAAGCCCAA
GGCCGGAGTTGAGGAAACCCTCATGCAAGCCCAGGGACGGGATCAAAATCAGCTAAAAAAAGAACTAAACCGGGCTGTGG
AACGCCTTAATCACCTGGTCGAAGCCCTGAACTACCCTATCCAAATTGTCATCAAGGAACTGCCGCCCAGGCTTAGAATG
GTATTAAAGGATAAACGAACGGGCCAAGAGAAGGAAATTGAATATGATGAATTGGACCAACTGGCTGCCCATCTGGAAGA
TGCCAAAGGGGTCCAGTTGGATGGTTACGCCTAG

Upstream 100 bases:

>100_bases
GCTCACGCCGACAGAAATCTTTGTATCAGAGAAATCACTACCATACGAGCGTGTGCCTGGCACCTCTAAGAAATTAGACA
CCGACAAAGAGGTGATATAA

Downstream 100 bases:

>100_bases
CACCCGCTTTACAGGGTGCTATTTTATTTGGTGCAAAGCAACAAAATGAAAACGAAAATACAAAATAGCATAAAGTGCTG
CAGTATGATGCAATGGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKIGAGGLQSIIMSDMMRSLEPTVKPKAGVEETLMQAQGRDQNQLKKELNRAVERLNHLVEALNYPIQIVIKELPPRLRM
VLKDKRTGQEKEIEYDELDQLAAHLEDAKGVQLDGYA

Sequences:

>Translated_117_residues
MKIGAGGLQSIIMSDMMRSLEPTVKPKAGVEETLMQAQGRDQNQLKKELNRAVERLNHLVEALNYPIQIVIKELPPRLRM
VLKDKRTGQEKEIEYDELDQLAAHLEDAKGVQLDGYA
>Mature_117_residues
MKIGAGGLQSIIMSDMMRSLEPTVKPKAGVEETLMQAQGRDQNQLKKELNRAVERLNHLVEALNYPIQIVIKELPPRLRM
VLKDKRTGQEKEIEYDELDQLAAHLEDAKGVQLDGYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13239; Mature: 13239

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGAGGLQSIIMSDMMRSLEPTVKPKAGVEETLMQAQGRDQNQLKKELNRAVERLNHLV
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EALNYPIQIVIKELPPRLRMVLKDKRTGQEKEIEYDELDQLAAHLEDAKGVQLDGYA
HHHCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKIGAGGLQSIIMSDMMRSLEPTVKPKAGVEETLMQAQGRDQNQLKKELNRAVERLNHLV
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EALNYPIQIVIKELPPRLRMVLKDKRTGQEKEIEYDELDQLAAHLEDAKGVQLDGYA
HHHCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA