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The map label for this gene is fliH [H]

Identifier: 134300245

GI number: 134300245

Start: 2627076

End: 2627792

Strand: Reverse

Name: fliH [H]

Synonym: Dred_2406

Alternate gene names: 134300245

Gene position: 2627792-2627076 (Counterclockwise)

Preceding gene: 134300246

Following gene: 134300244

Centisome position: 72.83

GC content: 49.65

Gene sequence:

>717_bases
TTGTTTAAGGTTATTAAAGGAGCACCTATAGAAGAAGTTGCTTGGTTAATACCCCTCAAGGAGCTTCCCCCACCACCCTC
TGAGGAAGTTAACCAGGAGAAGCAGCTTTCCCCAGAGGAAATAATGGTCCTTGCACAGCAGCAGGCAGCGGAAATGATAA
ACCGGGCCAAACAAGAGGCAAAACAGATCATTCAGCAGACCCAATCCAAGGCAGAGGCCGAAGCCCGGCAAATGAGGGAA
CAGGCGAAGCAGGCTGGCTGGCAGGAAGGAATCACAGCTTCCCAAGCCGAGGCCGAAAAGATCCGCCAGCAGGCCAGTGA
TGTTTTAAGGCAGTCCAAAGAGATTTATCGTCAAACCCTCGGGAAGATGGAAGCAGAGATTGTCGACTTGGCGGTGGATA
TTGCAGAACGGGTGGTACTGACACAATTGGCCGTGGAACCCCGCACCATTATGGAAATTGCCCGGGAATGTATGGATATG
GTAAAAAATAAACCTCTTGTTAATCTATACGTAAACCATGCGGATTATCAGATGGTACAAGAGGGAAAAAATGAACTGCT
TCAGGGGTTGCCGGGTAAAGTGGAAATGAACATATTGGTGGATAATGGCATAACCCCCGGGGGTTGCCGCATTGAGACAG
ATCAGGGACAGGTGGATGCTACCCTGGAAACCCGCTGGCAGGAAGTATTCAAAGTGCTTTACGGGAAAGAGGAGTGA

Upstream 100 bases:

>100_bases
AAGGATGTAGAAGAAGCCCAACAACGCATTGTGAATGTCATACGTCGTTTAGAAGAGGCGGGCGAGATTGTCATATCCCG
TGGTGGGGAGGATGCTATCC

Downstream 100 bases:

>100_bases
AGGGATGGAATGCAAGGTTAACATTAACCTTAATCCCTACAAGGAAAGAGTGTCCAGAGCCAGGGTTATTAAACCCATTG
GGAAGGTCACCAGGGTCATC

Product: flagellar biosynthesis/type III secretory pathway protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MFKVIKGAPIEEVAWLIPLKELPPPPSEEVNQEKQLSPEEIMVLAQQQAAEMINRAKQEAKQIIQQTQSKAEAEARQMRE
QAKQAGWQEGITASQAEAEKIRQQASDVLRQSKEIYRQTLGKMEAEIVDLAVDIAERVVLTQLAVEPRTIMEIARECMDM
VKNKPLVNLYVNHADYQMVQEGKNELLQGLPGKVEMNILVDNGITPGGCRIETDQGQVDATLETRWQEVFKVLYGKEE

Sequences:

>Translated_238_residues
MFKVIKGAPIEEVAWLIPLKELPPPPSEEVNQEKQLSPEEIMVLAQQQAAEMINRAKQEAKQIIQQTQSKAEAEARQMRE
QAKQAGWQEGITASQAEAEKIRQQASDVLRQSKEIYRQTLGKMEAEIVDLAVDIAERVVLTQLAVEPRTIMEIARECMDM
VKNKPLVNLYVNHADYQMVQEGKNELLQGLPGKVEMNILVDNGITPGGCRIETDQGQVDATLETRWQEVFKVLYGKEE
>Mature_238_residues
MFKVIKGAPIEEVAWLIPLKELPPPPSEEVNQEKQLSPEEIMVLAQQQAAEMINRAKQEAKQIIQQTQSKAEAEARQMRE
QAKQAGWQEGITASQAEAEKIRQQASDVLRQSKEIYRQTLGKMEAEIVDLAVDIAERVVLTQLAVEPRTIMEIARECMDM
VKNKPLVNLYVNHADYQMVQEGKNELLQGLPGKVEMNILVDNGITPGGCRIETDQGQVDATLETRWQEVFKVLYGKEE

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 26908; Mature: 26908

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVIKGAPIEEVAWLIPLKELPPPPSEEVNQEKQLSPEEIMVLAQQQAAEMINRAKQEA
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KQIIQQTQSKAEAEARQMREQAKQAGWQEGITASQAEAEKIRQQASDVLRQSKEIYRQTL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKMEAEIVDLAVDIAERVVLTQLAVEPRTIMEIARECMDMVKNKPLVNLYVNHADYQMVQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
EGKNELLQGLPGKVEMNILVDNGITPGGCRIETDQGQVDATLETRWQEVFKVLYGKEE
HHHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFKVIKGAPIEEVAWLIPLKELPPPPSEEVNQEKQLSPEEIMVLAQQQAAEMINRAKQEA
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
KQIIQQTQSKAEAEARQMREQAKQAGWQEGITASQAEAEKIRQQASDVLRQSKEIYRQTL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKMEAEIVDLAVDIAERVVLTQLAVEPRTIMEIARECMDMVKNKPLVNLYVNHADYQMVQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
EGKNELLQGLPGKVEMNILVDNGITPGGCRIETDQGQVDATLETRWQEVFKVLYGKEE
HHHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]