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The map label for this gene is flhF [H]

Identifier: 134300230

GI number: 134300230

Start: 2612451

End: 2613668

Strand: Reverse

Name: flhF [H]

Synonym: Dred_2391

Alternate gene names: 134300230

Gene position: 2613668-2612451 (Counterclockwise)

Preceding gene: 134300231

Following gene: 134300229

Centisome position: 72.44

GC content: 42.78

Gene sequence:

>1218_bases
TTGAAAATAAAAAAATATACCGTCAATGAAATGCAGGAAGCCATCCAACTAATCAAACAAGATTTAGGGTCCGAAGCGGT
TATTGTAAGTAGCCAACGGGTTAAGGGCAAGGGTTGGCTGGGCTGGTTGAAAAAATCCTTGGAGGTTACGGCAGTATTGG
ATGATGCCCCGGTTCAACCGGCCAAAACCCTTTTAACTGGTGGGGTACCAATAGAAAAATCGTTAGAGACAAAACCCCCA
CAAAGCCAATACCTGGATTACCGAGTCGCCAGAAGTCAAAAGATGCAGGATCCCGTTCATGCCCAAGTGCAGAGGATAAA
ACTGGGGGAAACCCGTTTTCAGCCTCTATTAGATGAAGTTTTATTGCAAATGGCCGAGGGGGAAGTCAAGACCCAGGCGA
AGCTGATAGAACCAGCTGTCAATGGCGACCAGGTCTATCAAAGATGGTTGGAGAAGTTGCTGGAAATGGACATTCAGCCC
GCCGTGGCTAAGACGTTATTGGATGCGGCATTGCTAAAGATAAAAGATAGTGAAGCATTGGATATGGTTGAACTGGTGTT
AATAAACCAGACAGCAGAGCTATTAAAGGCACCTTATAAAGGGGAAAAGAATTCCCGTTTCATGACCTTCATTGGTCAGC
CTGGAGTAGGGAAAACCACGACTCTGACTAAGCTAGCCACAAAGTATCAACTGCTGGAGAAAAAAAATGTTGCCCTAATT
ACCCTGTACACCTATCGATATGGCAGTACGGACCACCTGAAAATATATGGCGACAACCTTGATCTACCCGTGGAAGTAGT
GATGACGCCGACTGAATTGAGCCAAGCCATTGAAAAACACAGTAACAAAGACTATATTTTTATTGATACTGTGGGACGCT
CGTCCAATAACACTGGTCAGGTTCTGGAACTGAAGAGTTTTTTAGAGGTGATCCCGTCGGAAAACGATATTTTTCTGGTA
CTAAATGCCAGTACGAAAGATCGAGATTTGTTCCGAACTATCCATGATTTTCGCATAACCAGTTTTAATAAATTTATTTT
TACCAAGGTTGATGAAACAGCTACATTAGGTTCTATGTTAAATGTGGTGGGTAAAACAGGATTACCCATTGCCTACTATA
CAGATGGTCAGAGTATTCCAGATGATATTAAAAGGGCCCACCCCAAAAAAATAGCCAATTTGTTATTTAGGAGTGCCGAT
CGTTATGAAGATTGTTAA

Upstream 100 bases:

>100_bases
GAAGATTAATCGAGAGGCATTTACCAAACCTCGGGGTACTTTCTTTAAATGAAATACCGGCCAACCTAGAAGTAGAGGCC
ATTGGGACGGTGAGCATTGA

Downstream 100 bases:

>100_bases
CGGGCACTCCGGGGCCAGAGTAATAGCTGTTACCAGTGGTAAAGGCGGTGTGGGTAAATCAAATCTGGTAGTCAATCTGG
CTGTGGAATTAACTCGCCGC

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKIKKYTVNEMQEAIQLIKQDLGSEAVIVSSQRVKGKGWLGWLKKSLEVTAVLDDAPVQPAKTLLTGGVPIEKSLETKPP
QSQYLDYRVARSQKMQDPVHAQVQRIKLGETRFQPLLDEVLLQMAEGEVKTQAKLIEPAVNGDQVYQRWLEKLLEMDIQP
AVAKTLLDAALLKIKDSEALDMVELVLINQTAELLKAPYKGEKNSRFMTFIGQPGVGKTTTLTKLATKYQLLEKKNVALI
TLYTYRYGSTDHLKIYGDNLDLPVEVVMTPTELSQAIEKHSNKDYIFIDTVGRSSNNTGQVLELKSFLEVIPSENDIFLV
LNASTKDRDLFRTIHDFRITSFNKFIFTKVDETATLGSMLNVVGKTGLPIAYYTDGQSIPDDIKRAHPKKIANLLFRSAD
RYEDC

Sequences:

>Translated_405_residues
MKIKKYTVNEMQEAIQLIKQDLGSEAVIVSSQRVKGKGWLGWLKKSLEVTAVLDDAPVQPAKTLLTGGVPIEKSLETKPP
QSQYLDYRVARSQKMQDPVHAQVQRIKLGETRFQPLLDEVLLQMAEGEVKTQAKLIEPAVNGDQVYQRWLEKLLEMDIQP
AVAKTLLDAALLKIKDSEALDMVELVLINQTAELLKAPYKGEKNSRFMTFIGQPGVGKTTTLTKLATKYQLLEKKNVALI
TLYTYRYGSTDHLKIYGDNLDLPVEVVMTPTELSQAIEKHSNKDYIFIDTVGRSSNNTGQVLELKSFLEVIPSENDIFLV
LNASTKDRDLFRTIHDFRITSFNKFIFTKVDETATLGSMLNVVGKTGLPIAYYTDGQSIPDDIKRAHPKKIANLLFRSAD
RYEDC
>Mature_405_residues
MKIKKYTVNEMQEAIQLIKQDLGSEAVIVSSQRVKGKGWLGWLKKSLEVTAVLDDAPVQPAKTLLTGGVPIEKSLETKPP
QSQYLDYRVARSQKMQDPVHAQVQRIKLGETRFQPLLDEVLLQMAEGEVKTQAKLIEPAVNGDQVYQRWLEKLLEMDIQP
AVAKTLLDAALLKIKDSEALDMVELVLINQTAELLKAPYKGEKNSRFMTFIGQPGVGKTTTLTKLATKYQLLEKKNVALI
TLYTYRYGSTDHLKIYGDNLDLPVEVVMTPTELSQAIEKHSNKDYIFIDTVGRSSNNTGQVLELKSFLEVIPSENDIFLV
LNASTKDRDLFRTIHDFRITSFNKFIFTKVDETATLGSMLNVVGKTGLPIAYYTDGQSIPDDIKRAHPKKIANLLFRSAD
RYEDC

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=228, Percent_Identity=27.6315789473684, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17539958, Length=215, Percent_Identity=29.3023255813954, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6325345, Length=226, Percent_Identity=28.3185840707965, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 45611; Mature: 45611

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKYTVNEMQEAIQLIKQDLGSEAVIVSSQRVKGKGWLGWLKKSLEVTAVLDDAPVQP
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCCH
AKTLLTGGVPIEKSLETKPPQSQYLDYRVARSQKMQDPVHAQVQRIKLGETRFQPLLDEV
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
LLQMAEGEVKTQAKLIEPAVNGDQVYQRWLEKLLEMDIQPAVAKTLLDAALLKIKDSEAL
HHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
DMVELVLINQTAELLKAPYKGEKNSRFMTFIGQPGVGKTTTLTKLATKYQLLEKKNVALI
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEE
TLYTYRYGSTDHLKIYGDNLDLPVEVVMTPTELSQAIEKHSNKDYIFIDTVGRSSNNTGQ
EEEEEECCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
VLELKSFLEVIPSENDIFLVLNASTKDRDLFRTIHDFRITSFNKFIFTKVDETATLGSML
HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
NVVGKTGLPIAYYTDGQSIPDDIKRAHPKKIANLLFRSADRYEDC
HHHCCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKIKKYTVNEMQEAIQLIKQDLGSEAVIVSSQRVKGKGWLGWLKKSLEVTAVLDDAPVQP
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCCH
AKTLLTGGVPIEKSLETKPPQSQYLDYRVARSQKMQDPVHAQVQRIKLGETRFQPLLDEV
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
LLQMAEGEVKTQAKLIEPAVNGDQVYQRWLEKLLEMDIQPAVAKTLLDAALLKIKDSEAL
HHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
DMVELVLINQTAELLKAPYKGEKNSRFMTFIGQPGVGKTTTLTKLATKYQLLEKKNVALI
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEE
TLYTYRYGSTDHLKIYGDNLDLPVEVVMTPTELSQAIEKHSNKDYIFIDTVGRSSNNTGQ
EEEEEECCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
VLELKSFLEVIPSENDIFLVLNASTKDRDLFRTIHDFRITSFNKFIFTKVDETATLGSML
HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
NVVGKTGLPIAYYTDGQSIPDDIKRAHPKKIANLLFRSADRYEDC
HHHCCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1447978; 9384377 [H]