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The map label for this gene is 134300165

Identifier: 134300165

GI number: 134300165

Start: 2545088

End: 2545795

Strand: Reverse

Name: 134300165

Synonym: Dred_2326

Alternate gene names: NA

Gene position: 2545795-2545088 (Counterclockwise)

Preceding gene: 134300167

Following gene: 134300164

Centisome position: 70.56

GC content: 42.8

Gene sequence:

>708_bases
ATGGATAATTTGTGGCTTTTGCTACTGGGACTCTTAGCATTGGCTGTACTGGCATTTTTAGTTTTCCCTAGGAACCACAA
AACCGCCAATGCTTTAAAAAAACCCGAGTTGCCAACAAGGGAACCAGCGGAAGAGTTTGCACAAGAAATATCCCCGGAAA
TTCCAGAAGTTTCTCACCAAAAACCCGTCCCTCGAATGGAAGAGGATCCATTTATACCCCACTATTATGGAGTAAATCGG
CTGGTAGTAATGGCCAGGGATCCAAATTGGCTCTACGCATATTGGGAAGTGAATGACCAGAAAAAAAGGGAATTTATTCA
TCGGTACGGTGAAGAAAACTGGCTTACCTCCAGGCAGGTATTAAGAATTTATGATGTAACAGGTCTGAATAAGTATGAAC
GAGGGGGCCATAGCTACCAGGAAATTTCCCTAGACCCCTTTGCGGATAACTGGTTTATCGAAATTGGTCAGCCAGAACGC
ACATTTTTTCTGGAATTGGGGCGTGTATTACTGGATGGCCGGTATATTTTGTTACTGACTTCCAATATGGTGACTACGCC
AAGGGCCTCTGTTTCAGAACGTTTTGATGAACAGTGGATGTGGATTGAAGAAATGTATTTAAACAAAGAAAAACTTTCAT
ATGGTTTTAGCTCAGCCATGCTGGTGGGCAAGGGACTGGAACCCTTGGAAACTAGCTGTAAAATATAA

Upstream 100 bases:

>100_bases
AGGAAAGTCACATTGGTCTTAAAATTTCCTCATTCCCACCGTTTTAGTATAAAAAAGGTCAAAGTTTACATGTAATATCT
TGCCAAGGAGGGTAAAAAAG

Downstream 100 bases:

>100_bases
ATAACAGGAGGGATTCCCTTGACAAAGGGTTACCTATCAATTGTTTTACATGCACATTTACCCTATGTAAGGCATCCTGA
GAGTGAAAAATATCTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Rho Termination Factor Domain Protein; Protein-Like Protein; Rho Termination Factor N-Terminal Domain Family; Rho Termination Factor-Like

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDNLWLLLLGLLALAVLAFLVFPRNHKTANALKKPELPTREPAEEFAQEISPEIPEVSHQKPVPRMEEDPFIPHYYGVNR
LVVMARDPNWLYAYWEVNDQKKREFIHRYGEENWLTSRQVLRIYDVTGLNKYERGGHSYQEISLDPFADNWFIEIGQPER
TFFLELGRVLLDGRYILLLTSNMVTTPRASVSERFDEQWMWIEEMYLNKEKLSYGFSSAMLVGKGLEPLETSCKI

Sequences:

>Translated_235_residues
MDNLWLLLLGLLALAVLAFLVFPRNHKTANALKKPELPTREPAEEFAQEISPEIPEVSHQKPVPRMEEDPFIPHYYGVNR
LVVMARDPNWLYAYWEVNDQKKREFIHRYGEENWLTSRQVLRIYDVTGLNKYERGGHSYQEISLDPFADNWFIEIGQPER
TFFLELGRVLLDGRYILLLTSNMVTTPRASVSERFDEQWMWIEEMYLNKEKLSYGFSSAMLVGKGLEPLETSCKI
>Mature_235_residues
MDNLWLLLLGLLALAVLAFLVFPRNHKTANALKKPELPTREPAEEFAQEISPEIPEVSHQKPVPRMEEDPFIPHYYGVNR
LVVMARDPNWLYAYWEVNDQKKREFIHRYGEENWLTSRQVLRIYDVTGLNKYERGGHSYQEISLDPFADNWFIEIGQPER
TFFLELGRVLLDGRYILLLTSNMVTTPRASVSERFDEQWMWIEEMYLNKEKLSYGFSSAMLVGKGLEPLETSCKI

Specific function: Unknown

COG id: COG3330

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27588; Mature: 27588

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLWLLLLGLLALAVLAFLVFPRNHKTANALKKPELPTREPAEEFAQEISPEIPEVSHQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC
KPVPRMEEDPFIPHYYGVNRLVVMARDPNWLYAYWEVNDQKKREFIHRYGEENWLTSRQV
CCCCCCCCCCCCCCEECCCEEEEEEECCCEEEEEEEECCHHHHHHHHHHCCCCCCHHHHH
LRIYDVTGLNKYERGGHSYQEISLDPFADNWFIEIGQPERTFFLELGRVLLDGRYILLLT
EEEEECCCCCHHHCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
SNMVTTPRASVSERFDEQWMWIEEMYLNKEKLSYGFSSAMLVGKGLEPLETSCKI
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCCCCCCHHCCCC
>Mature Secondary Structure
MDNLWLLLLGLLALAVLAFLVFPRNHKTANALKKPELPTREPAEEFAQEISPEIPEVSHQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC
KPVPRMEEDPFIPHYYGVNRLVVMARDPNWLYAYWEVNDQKKREFIHRYGEENWLTSRQV
CCCCCCCCCCCCCCEECCCEEEEEEECCCEEEEEEEECCHHHHHHHHHHCCCCCCHHHHH
LRIYDVTGLNKYERGGHSYQEISLDPFADNWFIEIGQPERTFFLELGRVLLDGRYILLLT
EEEEECCCCCHHHCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE
SNMVTTPRASVSERFDEQWMWIEEMYLNKEKLSYGFSSAMLVGKGLEPLETSCKI
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA