| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is pyk [H]
Identifier: 134300151
GI number: 134300151
Start: 2529282
End: 2531033
Strand: Reverse
Name: pyk [H]
Synonym: Dred_2312
Alternate gene names: 134300151
Gene position: 2531033-2529282 (Counterclockwise)
Preceding gene: 134300152
Following gene: 134300150
Centisome position: 70.15
GC content: 47.03
Gene sequence:
>1752_bases ATGAGACGTACAAAGATTGTTTGCACCATCGGTCCCGCCAGTGAAGATGTGGAAACGCTGAAAAATATGATGCTGGCAGG CATGAATGTTGCAAGATTAAACTTTTCCCATGGTACCCATGAGGACCATGCCAAGAGAATTGCTGCTATTCGCCAGTCTG CAGATGAATTAAACAAAAATATTGCCATTCTGCTAGATACCAAGGGTCCGGAAATTCGTTTAAAGAAATTTGCCCAACCG CCGGTTATCCTAAAACAGGATCAGCAATTTACCCTGACAACCAGGGAGGTTACCGGTGACAATACCATTGTGTCTGTAAC TTATCAGGATTTGCCCAAGGATGTGAAGCCTGGCAGTCGGATAGCTGTGGCAGATGGGTTAATCGAAATGGTTGTGGAAT CTGTGGAGGGACCAGATGTTCATTGTAGAGTCGTTAATGGTGGTCAACTTTCCAACCAGAAGGGAGTTAATTTACCTGGT GTAAATGTAAACCTTCCTTCGATTACCGAAAAGGATATTGAGGACATTCGCTTTGGTATAGAGCAAAGGGTAGATTTTAT TGCTGCATCCTTTATTCGCAAACCCGGGGATGTCCTCGCCATTCGCCAAATCCTTGAGGAATATGATGCGGATATTGATA TCATAGCTAAGATTGAAAGTCGCCAGGGTGTGGAGAATCTGACTGGTATTATTAATGTTGCAGATGGTATCATGGTGGCC AGAGGTGACTTGGGCGTTGAAATCCCTGCAGAAGAAGTACCTGTCTTACAAAAGACGATGATTGAAATGTGCAACAGGGC AGGTAAACCAGTTATTACTGCTACACAAATGCTGGAGTCCATGACCCAGAATCCAAGACCAACCAGGGCCGAGGCCAGCG ATGTGGCTAATGCCATTTTTGATGGAACCGATGCAATTATGCTTTCCGGCGAAACAGCTGCGGGTAAGTATCCTGTACAA ACCGTTGAAACCATGGCTCGTATTGCCCAGCGGGCAGAGCTTGCTGTAAATTTTGATGACCTGCTGGAAATCAGAGGAGC TGCCATACAGAGAACGGTCACCGATGGTATTAGCCAGGCCGTTTGCAGTGTGGCTAGGGAATTGGGTGTAACCGCCATTG TAACCGCGACGGCCAGCGGACATACCGCCAGAATGATTTCCAAGTATAGGCCCAAAGTACCTGTGATTGCTGTGACACCC AGATCCAATGTGTTAAGAAAAATGGCTCTGGTTTGGGGGGTTGTTCCTCTTTTAATTGAAGATGTACATGGTACAGATGA AATGATTAATATATCCGTGGAAGCGGCCCTGGCCTCCGGACATATTACTGCTGGCGACCTAATTGTTATTACTGCCGGTG TACCGGTGGGTGTTCATGGTACCACCAATATGATGAAGGTTCACACAGTGGGGACTCTGCTGGCCAAAGGAACAGGCATT GGCCAGAAAGCTGTCACAGGTAAGGTTAGGATTTGTCGAACGGCGGAGGAAGCCATGGTTAAGGTTCAGCCGGGTGATAT TTTGGTGACTATGGCCACTGATCGTGACTTCGTGTCTGCTATGCAGAAAGCCAAAGCCGTGATAACGGAAGAAGGTGGTC TTACTTCCCATGCTGCCATTGTGGGACTGGAATTTGGCTTACCCGTTATAGTAGGCGTTGATAACGCCACTGGTATTCTA CCAGACGATGAAATTATTACGGTGGATAGCCAGCGAGGGCTGATTTACGGCGGTGTTGCCAGAGTTTTATAG
Upstream 100 bases:
>100_bases CCAGCCCCATTAATAAGAACATGTACGAATTAGCAAAGATATTATCCATATAGAAAAAACAGTAACTATATTTTTGTTTT TAGCAAGGGAGGTTCTGTGG
Downstream 100 bases:
>100_bases TATAAGCGAAGGGGGCTGTTGCACAATGAACCAGAGTGCAACAACCCCTTTCAATTTCTAAATATAAAATGCGGGTCCCG AAGAACCTACCAGACGGCGT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK; Vegetative protein 17; VEG17 [H]
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MRRTKIVCTIGPASEDVETLKNMMLAGMNVARLNFSHGTHEDHAKRIAAIRQSADELNKNIAILLDTKGPEIRLKKFAQP PVILKQDQQFTLTTREVTGDNTIVSVTYQDLPKDVKPGSRIAVADGLIEMVVESVEGPDVHCRVVNGGQLSNQKGVNLPG VNVNLPSITEKDIEDIRFGIEQRVDFIAASFIRKPGDVLAIRQILEEYDADIDIIAKIESRQGVENLTGIINVADGIMVA RGDLGVEIPAEEVPVLQKTMIEMCNRAGKPVITATQMLESMTQNPRPTRAEASDVANAIFDGTDAIMLSGETAAGKYPVQ TVETMARIAQRAELAVNFDDLLEIRGAAIQRTVTDGISQAVCSVARELGVTAIVTATASGHTARMISKYRPKVPVIAVTP RSNVLRKMALVWGVVPLLIEDVHGTDEMINISVEAALASGHITAGDLIVITAGVPVGVHGTTNMMKVHTVGTLLAKGTGI GQKAVTGKVRICRTAEEAMVKVQPGDILVTMATDRDFVSAMQKAKAVITEEGGLTSHAAIVGLEFGLPVIVGVDNATGIL PDDEIITVDSQRGLIYGGVARVL
Sequences:
>Translated_583_residues MRRTKIVCTIGPASEDVETLKNMMLAGMNVARLNFSHGTHEDHAKRIAAIRQSADELNKNIAILLDTKGPEIRLKKFAQP PVILKQDQQFTLTTREVTGDNTIVSVTYQDLPKDVKPGSRIAVADGLIEMVVESVEGPDVHCRVVNGGQLSNQKGVNLPG VNVNLPSITEKDIEDIRFGIEQRVDFIAASFIRKPGDVLAIRQILEEYDADIDIIAKIESRQGVENLTGIINVADGIMVA RGDLGVEIPAEEVPVLQKTMIEMCNRAGKPVITATQMLESMTQNPRPTRAEASDVANAIFDGTDAIMLSGETAAGKYPVQ TVETMARIAQRAELAVNFDDLLEIRGAAIQRTVTDGISQAVCSVARELGVTAIVTATASGHTARMISKYRPKVPVIAVTP RSNVLRKMALVWGVVPLLIEDVHGTDEMINISVEAALASGHITAGDLIVITAGVPVGVHGTTNMMKVHTVGTLLAKGTGI GQKAVTGKVRICRTAEEAMVKVQPGDILVTMATDRDFVSAMQKAKAVITEEGGLTSHAAIVGLEFGLPVIVGVDNATGIL PDDEIITVDSQRGLIYGGVARVL >Mature_583_residues MRRTKIVCTIGPASEDVETLKNMMLAGMNVARLNFSHGTHEDHAKRIAAIRQSADELNKNIAILLDTKGPEIRLKKFAQP PVILKQDQQFTLTTREVTGDNTIVSVTYQDLPKDVKPGSRIAVADGLIEMVVESVEGPDVHCRVVNGGQLSNQKGVNLPG VNVNLPSITEKDIEDIRFGIEQRVDFIAASFIRKPGDVLAIRQILEEYDADIDIIAKIESRQGVENLTGIINVADGIMVA RGDLGVEIPAEEVPVLQKTMIEMCNRAGKPVITATQMLESMTQNPRPTRAEASDVANAIFDGTDAIMLSGETAAGKYPVQ TVETMARIAQRAELAVNFDDLLEIRGAAIQRTVTDGISQAVCSVARELGVTAIVTATASGHTARMISKYRPKVPVIAVTP RSNVLRKMALVWGVVPLLIEDVHGTDEMINISVEAALASGHITAGDLIVITAGVPVGVHGTTNMMKVHTVGTLLAKGTGI GQKAVTGKVRICRTAEEAMVKVQPGDILVTMATDRDFVSAMQKAKAVITEEGGLTSHAAIVGLEFGLPVIVGVDNATGIL PDDEIITVDSQRGLIYGGVARVL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=486, Percent_Identity=44.6502057613169, Blast_Score=394, Evalue=1e-109, Organism=Homo sapiens, GI33286420, Length=486, Percent_Identity=44.6502057613169, Blast_Score=394, Evalue=1e-109, Organism=Homo sapiens, GI33286418, Length=486, Percent_Identity=45.4732510288066, Blast_Score=393, Evalue=1e-109, Organism=Homo sapiens, GI10835121, Length=489, Percent_Identity=44.5807770961145, Blast_Score=385, Evalue=1e-107, Organism=Homo sapiens, GI32967597, Length=489, Percent_Identity=44.5807770961145, Blast_Score=385, Evalue=1e-107, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=49.8257839721254, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=49.8257839721254, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=46.8085106382979, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=46.8085106382979, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=44.392523364486, Blast_Score=169, Evalue=8e-42, Organism=Escherichia coli, GI1787965, Length=473, Percent_Identity=48.8372093023256, Blast_Score=427, Evalue=1e-120, Organism=Escherichia coli, GI1788160, Length=487, Percent_Identity=39.0143737166324, Blast_Score=308, Evalue=5e-85, Organism=Escherichia coli, GI1787994, Length=137, Percent_Identity=37.2262773722628, Blast_Score=86, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17544584, Length=482, Percent_Identity=47.3029045643153, Blast_Score=400, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17506829, Length=487, Percent_Identity=44.35318275154, Blast_Score=363, Evalue=1e-100, Organism=Caenorhabditis elegans, GI71984413, Length=487, Percent_Identity=44.35318275154, Blast_Score=363, Evalue=1e-100, Organism=Caenorhabditis elegans, GI71984406, Length=487, Percent_Identity=44.35318275154, Blast_Score=363, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17506831, Length=487, Percent_Identity=44.35318275154, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17564524, Length=127, Percent_Identity=33.0708661417323, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319279, Length=493, Percent_Identity=43.6105476673428, Blast_Score=358, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6324923, Length=487, Percent_Identity=41.6837782340862, Blast_Score=341, Evalue=1e-94, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=46.1224489795918, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=46.1224489795918, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI24648966, Length=411, Percent_Identity=47.9318734793187, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24581235, Length=486, Percent_Identity=35.8024691358025, Blast_Score=289, Evalue=4e-78, Organism=Drosophila melanogaster, GI24646914, Length=304, Percent_Identity=41.4473684210526, Blast_Score=214, Evalue=1e-55,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 62307; Mature: 62307
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTKIVCTIGPASEDVETLKNMMLAGMNVARLNFSHGTHEDHAKRIAAIRQSADELNKN CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC IAILLDTKGPEIRLKKFAQPPVILKQDQQFTLTTREVTGDNTIVSVTYQDLPKDVKPGSR EEEEEECCCCCCHHHHCCCCCEEEECCCEEEEEEEEECCCCEEEEEEHHHCCCCCCCCCE IAVADGLIEMVVESVEGPDVHCRVVNGGQLSNQKGVNLPGVNVNLPSITEKDIEDIRFGI EEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EQRVDFIAASFIRKPGDVLAIRQILEEYDADIDIIAKIESRQGVENLTGIINVADGIMVA HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHECCCCEEEE RGDLGVEIPAEEVPVLQKTMIEMCNRAGKPVITATQMLESMTQNPRPTRAEASDVANAIF ECCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHH DGTDAIMLSGETAAGKYPVQTVETMARIAQRAELAVNFDDLLEIRGAAIQRTVTDGISQA CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEECHHHHHHHCCHHHHHHHHHHHHHH VCSVARELGVTAIVTATASGHTARMISKYRPKVPVIAVTPRSNVLRKMALVWGVVPLLIE HHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH DVHGTDEMINISVEAALASGHITAGDLIVITAGVPVGVHGTTNMMKVHTVGTLLAKGTGI HCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCEECCCCCCCEEEEEHHHHHHHCCCCC GQKAVTGKVRICRTAEEAMVKVQPGDILVTMATDRDFVSAMQKAKAVITEEGGLTSHAAI CCHHCCCCEEEEEEHHHCEEEECCCCEEEEEECCHHHHHHHHHHHHEEECCCCCCCCEEE VGLEFGLPVIVGVDNATGILPDDEIITVDSQRGLIYGGVARVL EEEECCCEEEEECCCCCCCCCCCCEEEEECCCCEEECCHHHCC >Mature Secondary Structure MRRTKIVCTIGPASEDVETLKNMMLAGMNVARLNFSHGTHEDHAKRIAAIRQSADELNKN CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC IAILLDTKGPEIRLKKFAQPPVILKQDQQFTLTTREVTGDNTIVSVTYQDLPKDVKPGSR EEEEEECCCCCCHHHHCCCCCEEEECCCEEEEEEEEECCCCEEEEEEHHHCCCCCCCCCE IAVADGLIEMVVESVEGPDVHCRVVNGGQLSNQKGVNLPGVNVNLPSITEKDIEDIRFGI EEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH EQRVDFIAASFIRKPGDVLAIRQILEEYDADIDIIAKIESRQGVENLTGIINVADGIMVA HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHECCCCEEEE RGDLGVEIPAEEVPVLQKTMIEMCNRAGKPVITATQMLESMTQNPRPTRAEASDVANAIF ECCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHH DGTDAIMLSGETAAGKYPVQTVETMARIAQRAELAVNFDDLLEIRGAAIQRTVTDGISQA CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEECHHHHHHHCCHHHHHHHHHHHHHH VCSVARELGVTAIVTATASGHTARMISKYRPKVPVIAVTPRSNVLRKMALVWGVVPLLIE HHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH DVHGTDEMINISVEAALASGHITAGDLIVITAGVPVGVHGTTNMMKVHTVGTLLAKGTGI HCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCEECCCCCCCEEEEEHHHHHHHCCCCC GQKAVTGKVRICRTAEEAMVKVQPGDILVTMATDRDFVSAMQKAKAVITEEGGLTSHAAI CCHHCCCCEEEEEEHHHCEEEECCCCEEEEEECCHHHHHHHHHHHHEEECCCCCCCCEEE VGLEFGLPVIVGVDNATGILPDDEIITVDSQRGLIYGGVARVL EEEECCCEEEEECCCCCCCCCCCCEEEEECCCCEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 9298659 [H]