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The map label for this gene is 134300144

Identifier: 134300144

GI number: 134300144

Start: 2520342

End: 2521844

Strand: Reverse

Name: 134300144

Synonym: Dred_2305

Alternate gene names: NA

Gene position: 2521844-2520342 (Counterclockwise)

Preceding gene: 134300147

Following gene: 134300143

Centisome position: 69.89

GC content: 39.99

Gene sequence:

>1503_bases
GTGGCTGCCATCGTTGCTCCATCGTACTCTGCATCCTTTGCCTTATCCGCAGGTAAAATGGTATCCTCCCTGAAGAAACT
TGGATTTTCTAGTGTTCAGGAAGTGGCATATGGAGCAGGAATATGTGCCAGAGAATATAAAAAATATTTCTATCAAGTTA
GTAGAAAACAGCCAATTATATCAACTGCTTGCCCGGCTGTTGTTCAACTGGTTGAAAAATATTTCCCCCAATTATTAGAT
TGCTTGGCCCCCATTGATTCTCCTATGTTAATCCAGGCAAAGATCATAAAGCGTGTTTACCCGGATTATAAAATAGTATT
TATTGGACCTTGTCTGTCGAAAAAAAATGAATCAATCGATCCTAATACCAGTGGCTATGTTGATGCAGTAATTACCTTTA
AACAACTTGAGCAGTGGTATAATCAGGAAGAAATGGAATGGCAACAGCTCAGTGAAGAACCTTGGGAAAATCCACAACCA
GATATAGCAAGGACTTTTCCCATCAGTGGAGGTCTGTTAAAAACCTCTGGTATTAATGAAGATATTGCCAGCATGGAAAT
TGTAGTGGTGGAAGGGGCCCGGCATTGCATTGAGGTGTTAAGGGCCATTGACAGCGGAGAGTTTACACCTCGGTTTGTTG
ATATGCTGGTATGTGAAGGCTGTGTGATGGGACCAGGCATGGTGAGTGAAAAACCATCGGTGGTAAGGTCCCAGTTGGTT
TTTAATACTGTTAAGAATAACAATAACCTCCCCCCGAATGAAGAATTTTTGCAGAAGATAAAGGAACTAACTTTTCAGCG
CACCTTTAAGGCAAAACCAATTGTAAAAAAGGAATTTACTGATGAACAAGTTTGGCAAACATTAAGGGAAACCGGTAAAC
TTAGTGCAAGGGATCTGGTTAATTGCAGCGCCTGTGGTTATGATACCTGTTGGGAAAAAGCTGTTGCTTGTTTGCAGGGT
ATGGCAGAAAAAGAAATGTGTCTCCCCTTTCTCCTGAGTCAGGTGCCAGCCTTAACCAATAGTCTTATGGACATGAGTAA
TAAGTTAATGCTTTCGATGGAATCTATTAATTTTTCAACCCTAACCCTTAAGGGATCCACATCAAAAATGAATGTTCGTA
ATCAACATTTGGAGGGGCTAATTAAAGAGACCAATACCATTGCTAAAGACACACTAGAACTGGCCAATAAAGTTTTAGAT
ATGGTATCACAGTATCAATGTCCTACCAATCAAGATACAGGGGAAACAACTACCCTGAGTCCTGACTTAGAAGAAATTAA
AAAGATTGCTGCTGAAACAAAGTTGCAATCCGAACAAGCCACCAATGCCTTTGCAGATATTGCCAGTGTTTTAAATAGTC
TTAGAGAAGATAGTGTAATGATTTTGGAACAGGAAAAGGCCATTAAGGTTGTAACAAATTCCCTGGAACAGATCGTTGCT
ACCTATGATCAACTTCTGAACATTGGTTCTGCAATGGCCAATATTGGAAGAAACTATGTATAA

Upstream 100 bases:

>100_bases
CCTTTGTTGTGGTCAGTGCGTTCTTGCCTGTTCCATTGGAGCGAAATTAGTCCAGGACGAGAAGCCGATTATCCAACAGT
GGCTAGCAGAAGGGAAAAAA

Downstream 100 bases:

>100_bases
TTTCCATAGGAGCAGCCCTTTCAGATAGAAAAGGGCTGTTTTTTATTACGAGGCATGAAAATATCGTCTTCGACAATATA
TATCTTTTTTCCATGAAGGA

Product: ferredoxin 2

Products: NA

Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MAAIVAPSYSASFALSAGKMVSSLKKLGFSSVQEVAYGAGICAREYKKYFYQVSRKQPIISTACPAVVQLVEKYFPQLLD
CLAPIDSPMLIQAKIIKRVYPDYKIVFIGPCLSKKNESIDPNTSGYVDAVITFKQLEQWYNQEEMEWQQLSEEPWENPQP
DIARTFPISGGLLKTSGINEDIASMEIVVVEGARHCIEVLRAIDSGEFTPRFVDMLVCEGCVMGPGMVSEKPSVVRSQLV
FNTVKNNNNLPPNEEFLQKIKELTFQRTFKAKPIVKKEFTDEQVWQTLRETGKLSARDLVNCSACGYDTCWEKAVACLQG
MAEKEMCLPFLLSQVPALTNSLMDMSNKLMLSMESINFSTLTLKGSTSKMNVRNQHLEGLIKETNTIAKDTLELANKVLD
MVSQYQCPTNQDTGETTTLSPDLEEIKKIAAETKLQSEQATNAFADIASVLNSLREDSVMILEQEKAIKVVTNSLEQIVA
TYDQLLNIGSAMANIGRNYV

Sequences:

>Translated_500_residues
MAAIVAPSYSASFALSAGKMVSSLKKLGFSSVQEVAYGAGICAREYKKYFYQVSRKQPIISTACPAVVQLVEKYFPQLLD
CLAPIDSPMLIQAKIIKRVYPDYKIVFIGPCLSKKNESIDPNTSGYVDAVITFKQLEQWYNQEEMEWQQLSEEPWENPQP
DIARTFPISGGLLKTSGINEDIASMEIVVVEGARHCIEVLRAIDSGEFTPRFVDMLVCEGCVMGPGMVSEKPSVVRSQLV
FNTVKNNNNLPPNEEFLQKIKELTFQRTFKAKPIVKKEFTDEQVWQTLRETGKLSARDLVNCSACGYDTCWEKAVACLQG
MAEKEMCLPFLLSQVPALTNSLMDMSNKLMLSMESINFSTLTLKGSTSKMNVRNQHLEGLIKETNTIAKDTLELANKVLD
MVSQYQCPTNQDTGETTTLSPDLEEIKKIAAETKLQSEQATNAFADIASVLNSLREDSVMILEQEKAIKVVTNSLEQIVA
TYDQLLNIGSAMANIGRNYV
>Mature_499_residues
AAIVAPSYSASFALSAGKMVSSLKKLGFSSVQEVAYGAGICAREYKKYFYQVSRKQPIISTACPAVVQLVEKYFPQLLDC
LAPIDSPMLIQAKIIKRVYPDYKIVFIGPCLSKKNESIDPNTSGYVDAVITFKQLEQWYNQEEMEWQQLSEEPWENPQPD
IARTFPISGGLLKTSGINEDIASMEIVVVEGARHCIEVLRAIDSGEFTPRFVDMLVCEGCVMGPGMVSEKPSVVRSQLVF
NTVKNNNNLPPNEEFLQKIKELTFQRTFKAKPIVKKEFTDEQVWQTLRETGKLSARDLVNCSACGYDTCWEKAVACLQGM
AEKEMCLPFLLSQVPALTNSLMDMSNKLMLSMESINFSTLTLKGSTSKMNVRNQHLEGLIKETNTIAKDTLELANKVLDM
VSQYQCPTNQDTGETTTLSPDLEEIKKIAAETKLQSEQATNAFADIASVLNSLREDSVMILEQEKAIKVVTNSLEQIVAT
YDQLLNIGSAMANIGRNYV

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR009016
- InterPro:   IPR004108
- InterPro:   IPR003149
- InterPro:   IPR013352
- InterPro:   IPR001041 [H]

Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]

EC number: =1.12.7.2 [H]

Molecular weight: Translated: 55662; Mature: 55531

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIVAPSYSASFALSAGKMVSSLKKLGFSSVQEVAYGAGICAREYKKYFYQVSRKQPII
CCEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH
STACPAVVQLVEKYFPQLLDCLAPIDSPMLIQAKIIKRVYPDYKIVFIGPCLSKKNESID
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
PNTSGYVDAVITFKQLEQWYNQEEMEWQQLSEEPWENPQPDIARTFPISGGLLKTSGINE
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEECCCCCC
DIASMEIVVVEGARHCIEVLRAIDSGEFTPRFVDMLVCEGCVMGPGMVSEKPSVVRSQLV
HHHCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
FNTVKNNNNLPPNEEFLQKIKELTFQRTFKAKPIVKKEFTDEQVWQTLRETGKLSARDLV
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHC
NCSACGYDTCWEKAVACLQGMAEKEMCLPFLLSQVPALTNSLMDMSNKLMLSMESINFST
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEE
LTLKGSTSKMNVRNQHLEGLIKETNTIAKDTLELANKVLDMVSQYQCPTNQDTGETTTLS
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDLEEIKKIAAETKLQSEQATNAFADIASVLNSLREDSVMILEQEKAIKVVTNSLEQIVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
TYDQLLNIGSAMANIGRNYV
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAIVAPSYSASFALSAGKMVSSLKKLGFSSVQEVAYGAGICAREYKKYFYQVSRKQPII
CEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH
STACPAVVQLVEKYFPQLLDCLAPIDSPMLIQAKIIKRVYPDYKIVFIGPCLSKKNESID
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
PNTSGYVDAVITFKQLEQWYNQEEMEWQQLSEEPWENPQPDIARTFPISGGLLKTSGINE
CCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEECCCCCC
DIASMEIVVVEGARHCIEVLRAIDSGEFTPRFVDMLVCEGCVMGPGMVSEKPSVVRSQLV
HHHCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
FNTVKNNNNLPPNEEFLQKIKELTFQRTFKAKPIVKKEFTDEQVWQTLRETGKLSARDLV
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHC
NCSACGYDTCWEKAVACLQGMAEKEMCLPFLLSQVPALTNSLMDMSNKLMLSMESINFST
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEE
LTLKGSTSKMNVRNQHLEGLIKETNTIAKDTLELANKVLDMVSQYQCPTNQDTGETTTLS
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDLEEIKKIAAETKLQSEQATNAFADIASVLNSLREDSVMILEQEKAIKVVTNSLEQIVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
TYDQLLNIGSAMANIGRNYV
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1911757; 9836629; 10529166 [H]