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The map label for this gene is yutI [H]

Identifier: 134300123

GI number: 134300123

Start: 2497616

End: 2497840

Strand: Reverse

Name: yutI [H]

Synonym: Dred_2284

Alternate gene names: 134300123

Gene position: 2497840-2497616 (Counterclockwise)

Preceding gene: 134300124

Following gene: 134300122

Centisome position: 69.23

GC content: 44.44

Gene sequence:

>225_bases
ATGAAGGAGCAGGTTAAAGAAGCATTAGAACAAGTACGTCCTTTTCTGCAAAGAGACGGTGGCGATGTTGAATTTGTAGA
TTGCGACGAAAAGGGTGTTGTAAAGGTTAAATTAAGAGGCGCATGCGGCAGTTGCCCCGGGGCTTTATATACACTGAAAA
ACGGTATAGAGCGTGTCCTTAAGCAACAAGTTCCTGGTGTAACCGAAGTTGTAAGGGTAGACTAG

Upstream 100 bases:

>100_bases
AGTAAATATTTCTTGTAAAATTGTATAGAAATAGTTTACAATATTTCTGTATGAAATCATCATGAAAGTAACAAACAGTA
AATTAAGGGGGGGCAGAAAA

Downstream 100 bases:

>100_bases
TTTACCAAAACCACAGGTAGCAGTTGCCTGTGGATTATTTTTACTTTCAACATAAACTTGGGGGAGCTATAATGTCATGT
CTTGTTCGGGGCACCTGAAA

Product: NifU domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKEQVKEALEQVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERVLKQQVPGVTEVVRVD

Sequences:

>Translated_74_residues
MKEQVKEALEQVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERVLKQQVPGVTEVVRVD
>Mature_74_residues
MKEQVKEALEQVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERVLKQQVPGVTEVVRVD

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI50593021, Length=70, Percent_Identity=45.7142857142857, Blast_Score=62, Evalue=8e-11,
Organism=Homo sapiens, GI50593025, Length=70, Percent_Identity=45.7142857142857, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17541876, Length=70, Percent_Identity=51.4285714285714, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45551492, Length=70, Percent_Identity=45.7142857142857, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643765, Length=70, Percent_Identity=45.7142857142857, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45556188, Length=70, Percent_Identity=45.7142857142857, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8160; Mature: 8160

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEQVKEALEQVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERVL
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
KQQVPGVTEVVRVD
HHHCCCHHHEEECC
>Mature Secondary Structure
MKEQVKEALEQVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERVL
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
KQQVPGVTEVVRVD
HHHCCCHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]