| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300064
Identifier: 134300064
GI number: 134300064
Start: 2430127
End: 2430957
Strand: Reverse
Name: 134300064
Synonym: Dred_2222
Alternate gene names: NA
Gene position: 2430957-2430127 (Counterclockwise)
Preceding gene: 134300065
Following gene: 134300063
Centisome position: 67.37
GC content: 39.35
Gene sequence:
>831_bases ATGAAGATAGCCGTTTTAAGTGGTAAAGGGGGAACAGGCAAAACCACCATTTCTGCCAGTTTTGCAGCATCAATAGCTTC TTGTCAGTATATTGACTGTGACGTTGAGGAGCCAAACGGATATATTTTTTTAAACCCTGATATTCAAAGAAGTCAGCAAG TAAAGGTTCTTGTGCCAGAAGTTGATAAAGCGAAATGTGATGGCTGCGGAGCATGTGGAACAGCATGCCAATTTAATGCA ATTGCCGTGTTAAAGGGGGAAGTACTTCTCTTTCACGAAATATGTCACCATTGTGGTGCATGTGTCATAGCCTGCCCAAG GGATGCAATCTATGAACAAGAAAGAATGATTGGGGTTATAGAGGCCAATAAAAATGATAATTTTCTTCATGGCAAACTAA ATGTGGGCGAACCCATTAGTGTTCCCATTATTCAAGAACTTAAAAACTTGATAAAAAAGGACAAGCCAGTAATCATTGAT TGTTCGCCGGGAGCATCTTGTGCAGTGGTGCAGTCTATTGAAGAATGTGACTACTGTGTATTAGTAACAGAACCAACGCC CTTCGGTTTACATGACCTGGAAATTGCTGTACAGCTTGTAAGAAAAATGAAGATGCCCTTTGGTATCATCATTAATAAAG CTTCTGATGATAGCAAGTTAATACACGATTATTGTCGTAGCGAAGGTATTAAGATTCTTATGGAAATACCCTTTTCAACG GAGATTGCCAAAGCCTATTCGGAGGGCATTTTGCCCATTCAAAAGGACATTGTATTAAAGCAAAAGTTTGAAAAACTCTA TGAAAAACTGGTAAGGGGTGAGTACCAATAA
Upstream 100 bases:
>100_bases CAATAGAAGAGAATATCGAAAAGTATCAGAAGGGACTGCTTGAGAAAATTAGCACTGCAGTGCCAGCGCATTTTGGCATG GGATCTATGGAGGCATAAAA
Downstream 100 bases:
>100_bases AACAAATAGTCTTTATCAGTGGAAAGGGCGGAACAGGAAAAAGCACCTTGGTTTCATCCTTGAGTCTCTTAGTCAAAGAT AAAATGTTGGCGGACTGTGA
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKIAVLSGKGGTGKTTISASFAASIASCQYIDCDVEEPNGYIFLNPDIQRSQQVKVLVPEVDKAKCDGCGACGTACQFNA IAVLKGEVLLFHEICHHCGACVIACPRDAIYEQERMIGVIEANKNDNFLHGKLNVGEPISVPIIQELKNLIKKDKPVIID CSPGASCAVVQSIEECDYCVLVTEPTPFGLHDLEIAVQLVRKMKMPFGIIINKASDDSKLIHDYCRSEGIKILMEIPFST EIAKAYSEGILPIQKDIVLKQKFEKLYEKLVRGEYQ
Sequences:
>Translated_276_residues MKIAVLSGKGGTGKTTISASFAASIASCQYIDCDVEEPNGYIFLNPDIQRSQQVKVLVPEVDKAKCDGCGACGTACQFNA IAVLKGEVLLFHEICHHCGACVIACPRDAIYEQERMIGVIEANKNDNFLHGKLNVGEPISVPIIQELKNLIKKDKPVIID CSPGASCAVVQSIEECDYCVLVTEPTPFGLHDLEIAVQLVRKMKMPFGIIINKASDDSKLIHDYCRSEGIKILMEIPFST EIAKAYSEGILPIQKDIVLKQKFEKLYEKLVRGEYQ >Mature_276_residues MKIAVLSGKGGTGKTTISASFAASIASCQYIDCDVEEPNGYIFLNPDIQRSQQVKVLVPEVDKAKCDGCGACGTACQFNA IAVLKGEVLLFHEICHHCGACVIACPRDAIYEQERMIGVIEANKNDNFLHGKLNVGEPISVPIIQELKNLIKKDKPVIID CSPGASCAVVQSIEECDYCVLVTEPTPFGLHDLEIAVQLVRKMKMPFGIIINKASDDSKLIHDYCRSEGIKILMEIPFST EIAKAYSEGILPIQKDIVLKQKFEKLYEKLVRGEYQ
Specific function: Unknown
COG id: COG1149
COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 30325; Mature: 30325
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVLSGKGGTGKTTISASFAASIASCQYIDCDVEEPNGYIFLNPDIQRSQQVKVLVPE CEEEEEECCCCCCCEEEEHHHHHHHHCCEEEECCCCCCCCEEEECCCCCCCCEEEEEECC VDKAKCDGCGACGTACQFNAIAVLKGEVLLFHEICHHCGACVIACPRDAIYEQERMIGVI CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEECCCHHHHHHHHEEEEE EANKNDNFLHGKLNVGEPISVPIIQELKNLIKKDKPVIIDCSPGASCAVVQSIEECDYCV EECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCEEE LVTEPTPFGLHDLEIAVQLVRKMKMPFGIIINKASDDSKLIHDYCRSEGIKILMEIPFST EEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCH EIAKAYSEGILPIQKDIVLKQKFEKLYEKLVRGEYQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKIAVLSGKGGTGKTTISASFAASIASCQYIDCDVEEPNGYIFLNPDIQRSQQVKVLVPE CEEEEEECCCCCCCEEEEHHHHHHHHCCEEEECCCCCCCCEEEECCCCCCCCEEEEEECC VDKAKCDGCGACGTACQFNAIAVLKGEVLLFHEICHHCGACVIACPRDAIYEQERMIGVI CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEECCCHHHHHHHHEEEEE EANKNDNFLHGKLNVGEPISVPIIQELKNLIKKDKPVIIDCSPGASCAVVQSIEECDYCV EECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCEEE LVTEPTPFGLHDLEIAVQLVRKMKMPFGIIINKASDDSKLIHDYCRSEGIKILMEIPFST EEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCH EIAKAYSEGILPIQKDIVLKQKFEKLYEKLVRGEYQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]