| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300062
Identifier: 134300062
GI number: 134300062
Start: 2428836
End: 2429252
Strand: Reverse
Name: 134300062
Synonym: Dred_2220
Alternate gene names: NA
Gene position: 2429252-2428836 (Counterclockwise)
Preceding gene: 134300063
Following gene: 134300061
Centisome position: 67.33
GC content: 39.81
Gene sequence:
>417_bases ATGCGTGTAGCAATACCGACAGATGGAGATTATGTTTCTGCACATTTTGGAAGATGTCCTATTTTTACTTTGGTGGATCT AGAAAATAATAAGGAAGTAAAGAGAGTTATTATTGAGAATCCCGGTCATGCACCAGGACTTGTCCCCAAACTCCTTCATG AAAAAAACGTAGAAGTTATTATTTGTGGGGGCATGGGTGCTAAGGCAGTAAGCTTAATTCAAGAATATAAGATGCAGGCA ATCTCAGGGGTGTCTGGAAAGATAGATGAAGTAATAGCCAAATTTGAGAAAGGTGTACTTGAAAGTGGAGAAAGTATGTG TACACCCGGAGCCGGCAGAGGCTATGGCATTGAGAAAAATGAATGTGACCATGGACATGAAAAAGAAAACTGTGAGCATG ATCATGACCATGAATAA
Upstream 100 bases:
>100_bases CAGTTGAGGCAGGAAATAGTCATGTCACTGACGAGATTATAAGTATATGGACAAAAGTAACAGAAAAATTAAATTAATTA ATTTTCAGGGGGAATCGAAT
Downstream 100 bases:
>100_bases GAATTTTCCCGTTGATAAAAAGTAACAGTGGTTTATTTTATAATTACATTTGTATATTTTTATGTATTATAAAGCCTAGT TATCATAAGGCTTTATTTTT
Product: dinitrogenase iron-molybdenum cofactor biosynthesis protein
Products: NA
Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; ATPase-Like ParA/MinD; Dinitrogenase Iron-Molybdenum Cofactor NIF B/Y/X ; Dinitrogenase Iron-Molybdenum Cofactor Family Protein; Nitrogenase Iron-Molybdenum Cofactor Protein
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRVAIPTDGDYVSAHFGRCPIFTLVDLENNKEVKRVIIENPGHAPGLVPKLLHEKNVEVIICGGMGAKAVSLIQEYKMQA ISGVSGKIDEVIAKFEKGVLESGESMCTPGAGRGYGIEKNECDHGHEKENCEHDHDHE
Sequences:
>Translated_138_residues MRVAIPTDGDYVSAHFGRCPIFTLVDLENNKEVKRVIIENPGHAPGLVPKLLHEKNVEVIICGGMGAKAVSLIQEYKMQA ISGVSGKIDEVIAKFEKGVLESGESMCTPGAGRGYGIEKNECDHGHEKENCEHDHDHE >Mature_138_residues MRVAIPTDGDYVSAHFGRCPIFTLVDLENNKEVKRVIIENPGHAPGLVPKLLHEKNVEVIICGGMGAKAVSLIQEYKMQA ISGVSGKIDEVIAKFEKGVLESGESMCTPGAGRGYGIEKNECDHGHEKENCEHDHDHE
Specific function: Unknown
COG id: COG1433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15050; Mature: 15050
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAIPTDGDYVSAHFGRCPIFTLVDLENNKEVKRVIIENPGHAPGLVPKLLHEKNVEVI CEECCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEE ICGGMGAKAVSLIQEYKMQAISGVSGKIDEVIAKFEKGVLESGESMCTPGAGRGYGIEKN EECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ECDHGHEKENCEHDHDHE CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRVAIPTDGDYVSAHFGRCPIFTLVDLENNKEVKRVIIENPGHAPGLVPKLLHEKNVEVI CEECCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEE ICGGMGAKAVSLIQEYKMQAISGVSGKIDEVIAKFEKGVLESGESMCTPGAGRGYGIEKN EECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC ECDHGHEKENCEHDHDHE CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA