| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300016
Identifier: 134300016
GI number: 134300016
Start: 2374167
End: 2374835
Strand: Reverse
Name: 134300016
Synonym: Dred_2170
Alternate gene names: NA
Gene position: 2374835-2374167 (Counterclockwise)
Preceding gene: 134300018
Following gene: 134300015
Centisome position: 65.82
GC content: 36.92
Gene sequence:
>669_bases ATGAAAGTAAAAGTTTTTATAAAAAATAAAGATGTTTACGATTTACAGATTTTAGATGAGACTGCTTCTGTACAGGATTA TTTAGATGCTATCAATAAATTTATCGATGAAAACACGAATCCACCTTGTCGAGGCTGTGATGAATGCTGTTGGGAAAGAA TTCCCCTTACCAGTATTGATGTACTAAACTATATTAATCAGTTAGGGGGAGCACTGGTCCTGGATAATGAATGGCCTCTA TTGGATTTCTTAGATCAGTATACCTATATTTATGCTGAAGGTGGCGCTGTGGATATTAGTCTGGGCTTTACCCAGGAGGG TGCTTGCCATTTCCTTGATCAGGAGCAGCATATCTGTGGTAGTTATACTGCCAGATCCCTGGTTTGTCAGAGTTTTATTT GTATGGAAAGTACTAAGTCTGCCCAGGATTTTCGTTCGGAATTGGTAAATACAGGTATGGATGAATTGGTTCGCTTATGG ATGAGCCAGTGTAAAGACGCTGGTATTAGATTATTTTACCACGAAGAGTACCAAGCAAGCCCTCAAGGGGAAGATTATCC TGAAAATGGTTTTACCGGTAAAAAAACATACAAAGATGTGCTGCTAAAAGAGGTTTGTAGTTTAGAAGTATGGAATAATA TATATAAAGAAAATTCTCAAAAATTATAA
Upstream 100 bases:
>100_bases CTTTTTTTTATTTCCTGTCAATTTTGTTTGAAACCTATCTGAGAGGTTATATATAAAAAACAAAAAGTTAAAATAATATT TTTGTAAAAGGGAGAGCGTT
Downstream 100 bases:
>100_bases CGGGTTAAAAAATTGAAGCAAGGAAATACTATCCATATGATTACTGATATTAATACCTACCGCCATAAACAAAAAATAAC TAGGATTAATGAGCTGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSIDVLNYINQLGGALVLDNEWPL LDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICGSYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLW MSQCKDAGIRLFYHEEYQASPQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL
Sequences:
>Translated_222_residues MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSIDVLNYINQLGGALVLDNEWPL LDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICGSYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLW MSQCKDAGIRLFYHEEYQASPQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL >Mature_222_residues MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSIDVLNYINQLGGALVLDNEWPL LDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICGSYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLW MSQCKDAGIRLFYHEEYQASPQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25475; Mature: 25475
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSID CEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHH VLNYINQLGGALVLDNEWPLLDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICG HHHHHHHHCCEEEECCCCCHHHHHHHCEEEEECCCEEEEEECCCCCCCHHHCCCHHHHHH SYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLWMSQCKDAGIRLFYHEEYQAS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCC PQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSID CEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHH VLNYINQLGGALVLDNEWPLLDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICG HHHHHHHHCCEEEECCCCCHHHHHHHCEEEEECCCEEEEEECCCCCCCHHHCCCHHHHHH SYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLWMSQCKDAGIRLFYHEEYQAS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCC PQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA