| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is ybjQ [C]
Identifier: 134300001
GI number: 134300001
Start: 2359842
End: 2360153
Strand: Reverse
Name: ybjQ [C]
Synonym: Dred_2155
Alternate gene names: 134300001
Gene position: 2360153-2359842 (Counterclockwise)
Preceding gene: 134300002
Following gene: 134299999
Centisome position: 65.41
GC content: 50.32
Gene sequence:
>312_bases ATGATTATCACAACAACAGGAATCATTGAGGGGAAACCCATCCGGCAGTATTTTGGCTTAGTTAATGGAGAAGCCATTAT GGGTGCCAATGTGGTGCGGGACATCTTTGCCAGTATCACTGATATTGTTGGTGGACGTAGTGGTGCATATGAAAGCAAAC TGGCCCATGCCCGGGAAATTGCCCTGGAAGAAATGACAGAACAGGCCCGCCGCATGGGGGCCAATGCCATTGTGGGTGTG GACCTGGACTACGAAGTGATCCGGGAGGGTATGCTAATGGTTTCTGCCAGCGGTACCGCTGTACAAATCTAA
Upstream 100 bases:
>100_bases AAGGAATAAATTTTACAAAAGGATAGGTCAGGCCCTATCCTTTTGTTGTATAAAAATAATCCATATTACGAAAAATATAT GTATCAGGAGGAAAGATGTT
Downstream 100 bases:
>100_bases TAGGTATGGATGTAAAAAGCACGGGCATTGGCCGTGCTTTTTAATAATATCCCACTTTATTTAAGTTCGTAGGTTCTAAA GGGTGGGCTAGACAAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREIALEEMTEQARRMGANAIVGV DLDYEVIREGMLMVSASGTAVQI
Sequences:
>Translated_103_residues MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREIALEEMTEQARRMGANAIVGV DLDYEVIREGMLMVSASGTAVQI >Mature_103_residues MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREIALEEMTEQARRMGANAIVGV DLDYEVIREGMLMVSASGTAVQI
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family
Homologues:
Organism=Escherichia coli, GI1787091, Length=104, Percent_Identity=59.6153846153846, Blast_Score=123, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2155_DESRM (A4J6G9)
Other databases:
- EMBL: CP000612 - RefSeq: YP_001113497.1 - ProteinModelPortal: A4J6G9 - SMR: A4J6G9 - STRING: A4J6G9 - GeneID: 4958265 - GenomeReviews: CP000612_GR - KEGG: drm:Dred_2155 - eggNOG: COG0393 - HOGENOM: HBG339160 - OMA: DFEISMP - PhylomeDB: A4J6G9 - BioCyc: DRED349161:DRED_2155-MONOMER - HAMAP: MF_00338 - InterPro: IPR002765 - Gene3D: G3DSA:3.30.110.70
Pfam domain/function: PF01906 DUF74
EC number: NA
Molecular weight: Translated: 11031; Mature: 11031
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREI CEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ALEEMTEQARRMGANAIVGVDLDYEVIREGMLMVSASGTAVQI HHHHHHHHHHHCCCCEEEECCCCHHHHHCCEEEEECCCCEEEC >Mature Secondary Structure MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREI CEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ALEEMTEQARRMGANAIVGVDLDYEVIREGMLMVSASGTAVQI HHHHHHHHHHHCCCCEEEECCCCHHHHHCCEEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA