| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299974
Identifier: 134299974
GI number: 134299974
Start: 2324311
End: 2325633
Strand: Reverse
Name: 134299974
Synonym: Dred_2128
Alternate gene names: NA
Gene position: 2325633-2324311 (Counterclockwise)
Preceding gene: 134299975
Following gene: 134299973
Centisome position: 64.46
GC content: 30.31
Gene sequence:
>1323_bases TTGAATTTACAAGAGTATATAAATGTTGTCCATGATGGCAAACCAGATTGGTTTGTAAGTGAATGTAATAGTTATTACCA CCAAAGCAGAATCAATAATATTATTGACATAAAAGAATATTTGAGTGGTAGTCATTTAATCAATAATAGGCCAGCGGAAA TGTGGAACGGAAAAGTATTTGAACCCAGGAGAATAGTTTTACAGTATGCTAAGACAGTTTTAAATTTTAGTACAAGTTAT CTGTTAAAAAATCCCGTAACAATTACAGGTGAAGAAAATGACGTTAAAGTGATGAAGAAAGTTTATAAGCAAGGTAAATT CAATAGAACTGATTTAGATATAATGGACAAGTTAGTTAAATATGGTGCTGTCTATAAATATTTGTTTATTGATAAAGACG GAAAGATTAAGAGTAAATTAATTAATCCAGAGGATGCTTATCCTATCTATAATGAGCAGGGAGAAATGATTTGTTTTATA GAACATTATACAACTGATTATAATGTTAGTTACTACAATATCTTTACTGATAGTACAGTCCAAAAATGGTCTGATGCTGG AGGAGATTTTAATTTCTTAGGAGTTTTTAATAATCCTAGTGGGCTACCTTGTGTTTATAAGAATTTGAATGAGTTAGATA ATACAGATGGAAGATCAGATTTAGAGGATTTTATAAACATCATAGATAATATGGAGGATTTGATTAGTAAATATACTGAC AGTATTTACAAGTTTCTAAATCCTATTCCTGTAGTGATAGGACAGAGATTAAATATAAAAGATGGCAAAGGTGAGATACC AACAAACTTAGTTGGTGTTGGTCTTAATTTAGATGATGGAGCAGACATGAAATTTATTCATGGTCAATTGGATTTTGAAA GTTTTGAGAGCGTTTGGAAGGTATTAAAGCAATCATTGTTAGATATTAGTAATACTCCTGCTGTATCAATGAATAATACA GATATTAGCAATTTATCAGAAGTGAGTATAAAATTATTGTTTTCCCTAGCAGATATTAAAGCAGGATTAAATGAGCGATA TATTAGAGAAGGATTTGAACAAAGGTTTAAAAAAATAGAGAAATTGTTGAGGTTGCAGGGTATAGAGATTAATTCAGATA ATATTGATGTTGTGTTCCAGTATGCAAGGCCACTAAATGAAACGGATATTATTGATAATATTAAGGTGCTGAAGGAATTA GGAGTAATGAGTTTACAGAGTGCTATTGAGAATTGTCCAATGATATACGATGTTGGAAGTGAAATGGAAAGATTAGGTAA AGAAGGGAATGGATTGGAGAATACGGATATTGTAAATAGTTAA
Upstream 100 bases:
>100_bases TGGTATGTTTGACATTAAATTGTTTCACGTGAAACATATATTATAATTGACAACTTAATCATTTGTCAAGGTGTCAATTT TAGATAAGGAGGGGTTAACT
Downstream 100 bases:
>100_bases TTAGGGTGGGTTGTTTTAATTGATAATGATTATTAATTAGAAGTATAGGTGTCAAGGTATATTACTTTACAGAATGTTAG TTCAAAAATTTCGCCCATGT
Product: phage portal protein, SPP1
Products: NA
Alternate protein names: Portal Protein; Phage Portal Protein
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVFEPRRIVLQYAKTVLNFSTSY LLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVKYGAVYKYLFIDKDGKIKSKLINPEDAYPIYNEQGEMICFI EHYTTDYNVSYYNIFTDSTVQKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWKVLKQSLLDISNTPAVSMNNT DISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIEKLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKEL GVMSLQSAIENCPMIYDVGSEMERLGKEGNGLENTDIVNS
Sequences:
>Translated_440_residues MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVFEPRRIVLQYAKTVLNFSTSY LLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVKYGAVYKYLFIDKDGKIKSKLINPEDAYPIYNEQGEMICFI EHYTTDYNVSYYNIFTDSTVQKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWKVLKQSLLDISNTPAVSMNNT DISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIEKLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKEL GVMSLQSAIENCPMIYDVGSEMERLGKEGNGLENTDIVNS >Mature_440_residues MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVFEPRRIVLQYAKTVLNFSTSY LLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVKYGAVYKYLFIDKDGKIKSKLINPEDAYPIYNEQGEMICFI EHYTTDYNVSYYNIFTDSTVQKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWKVLKQSLLDISNTPAVSMNNT DISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIEKLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKEL GVMSLQSAIENCPMIYDVGSEMERLGKEGNGLENTDIVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50347; Mature: 50347
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC EPRRIVLQYAKTVLNFSTSYLLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVK CHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH YGAVYKYLFIDKDGKIKSKLINPEDAYPIYNEQGEMICFIEHYTTDYNVSYYNIFTDSTV HHHEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHH QKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWK HHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHH VLKQSLLDISNTPAVSMNNTDISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIE HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKELGVMSLQSAIENCPMIYDVGS HHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCH EMERLGKEGNGLENTDIVNS HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNLQEYINVVHDGKPDWFVSECNSYYHQSRINNIIDIKEYLSGSHLINNRPAEMWNGKVF CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC EPRRIVLQYAKTVLNFSTSYLLKNPVTITGEENDVKVMKKVYKQGKFNRTDLDIMDKLVK CHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH YGAVYKYLFIDKDGKIKSKLINPEDAYPIYNEQGEMICFIEHYTTDYNVSYYNIFTDSTV HHHEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHH QKWSDAGGDFNFLGVFNNPSGLPCVYKNLNELDNTDGRSDLEDFINIIDNMEDLISKYTD HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SIYKFLNPIPVVIGQRLNIKDGKGEIPTNLVGVGLNLDDGADMKFIHGQLDFESFESVWK HHHHHHCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHH VLKQSLLDISNTPAVSMNNTDISNLSEVSIKLLFSLADIKAGLNERYIREGFEQRFKKIE HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KLLRLQGIEINSDNIDVVFQYARPLNETDIIDNIKVLKELGVMSLQSAIENCPMIYDVGS HHHHHCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCH EMERLGKEGNGLENTDIVNS HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA