| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is pstS1 [H]
Identifier: 134299952
GI number: 134299952
Start: 2304602
End: 2305456
Strand: Reverse
Name: pstS1 [H]
Synonym: Dred_2106
Alternate gene names: 134299952
Gene position: 2305456-2304602 (Counterclockwise)
Preceding gene: 134299969
Following gene: 134299951
Centisome position: 63.9
GC content: 42.34
Gene sequence:
>855_bases ATGTTTAAAAACACCAAGAAGTTAATGCTGGTACTTACTTTAATCCTGGCTGCTACAGTTGTCTTTGCTGGCTGTGGCAA GAAAGAAGAAGCGCCCAAGGCTGAAGGAGAAAAGGGAGCTGGACTCTCTGGTTCCATAACCATTGCTGGTTCCACTTCTG TTCAACCCCTTTCGGAAGAATTAGCAAAGGCTTTTATGACTAAAAACTCCGGTGTAACTGTTAACGTACAGGGTGGTGGA TCTTCTGCTGGTGTTAAGGCTGCTAACGAAGGCGCTGCTCAAATTGGTGCTTCTTCCCGTGACCTAAAGGAATCTGAGAA GGGTATGGGATTAACGGAAACAAAAATTGCTCTGGATGGTATTGCTGTTGTTGTTAACCCTAAGAACCAAGTAGCTGATT TAACCATGGAACAAGTTGCCAAAATCTTTTCCGGTGAGATTAAAAACTGGAAAGAGGTTGGTGGTAAGGATGCTGCAATC AACGTAGTAACCCGTGAAGAAGGTTCTGGTACCCGCGGTGCCTTTGAAGAAATCGTTTTGGGTGAAGCCAAAATGGATTC CAAGGCAATTACTCAGCCTTCCACTGGTTCCGTTAAAACCACCGTTGCTGGTGATGAAAATGCCATTGGTTATATCTCCT TGGGTTCTTTAAATGAGGAAGTTAAAGGTGTTAAAGTAGATGGTGTTAAACCTACTGTTGATAATGTAAAAGCTGGTGCC TTTAAAATCTCCCGCCCCTTCCTGTATCTGACCAAAGGTGAAATGAACGAAGTTACCAAAGCTTACGTTGATTTTGTAAT GAGTGAAGAAGGTCAAAAAATTGTTGGGGAATCTCACTTTATCTCAATAAAATAA
Upstream 100 bases:
>100_bases AAATAAAAAAACCAGCCCGGTAAATAATAAAAACTATAAAACTAAGTTAGATAGTGAGTTAAAAATTAATCATAATAAAC TAAAAATAAGGAGGAAAATC
Downstream 100 bases:
>100_bases TTAGTTTAAACCTAAAGTATAACAAAAATAAATAGGTGGGGAGGGTTGGATAGCAACCCTCTCTGTACCTATTTTTAGGT GAGGTAAGTGGCATGAAGAA
Product: phosphate binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MFKNTKKLMLVLTLILAATVVFAGCGKKEEAPKAEGEKGAGLSGSITIAGSTSVQPLSEELAKAFMTKNSGVTVNVQGGG SSAGVKAANEGAAQIGASSRDLKESEKGMGLTETKIALDGIAVVVNPKNQVADLTMEQVAKIFSGEIKNWKEVGGKDAAI NVVTREEGSGTRGAFEEIVLGEAKMDSKAITQPSTGSVKTTVAGDENAIGYISLGSLNEEVKGVKVDGVKPTVDNVKAGA FKISRPFLYLTKGEMNEVTKAYVDFVMSEEGQKIVGESHFISIK
Sequences:
>Translated_284_residues MFKNTKKLMLVLTLILAATVVFAGCGKKEEAPKAEGEKGAGLSGSITIAGSTSVQPLSEELAKAFMTKNSGVTVNVQGGG SSAGVKAANEGAAQIGASSRDLKESEKGMGLTETKIALDGIAVVVNPKNQVADLTMEQVAKIFSGEIKNWKEVGGKDAAI NVVTREEGSGTRGAFEEIVLGEAKMDSKAITQPSTGSVKTTVAGDENAIGYISLGSLNEEVKGVKVDGVKPTVDNVKAGA FKISRPFLYLTKGEMNEVTKAYVDFVMSEEGQKIVGESHFISIK >Mature_284_residues MFKNTKKLMLVLTLILAATVVFAGCGKKEEAPKAEGEKGAGLSGSITIAGSTSVQPLSEELAKAFMTKNSGVTVNVQGGG SSAGVKAANEGAAQIGASSRDLKESEKGMGLTETKIALDGIAVVVNPKNQVADLTMEQVAKIFSGEIKNWKEVGGKDAAI NVVTREEGSGTRGAFEEIVLGEAKMDSKAITQPSTGSVKTTVAGDENAIGYISLGSLNEEVKGVKVDGVKPTVDNVKAGA FKISRPFLYLTKGEMNEVTKAYVDFVMSEEGQKIVGESHFISIK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29580; Mature: 29580
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKNTKKLMLVLTLILAATVVFAGCGKKEEAPKAEGEKGAGLSGSITIAGSTSVQPLSEE CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHH LAKAFMTKNSGVTVNVQGGGSSAGVKAANEGAAQIGASSRDLKESEKGMGLTETKIALDG HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCHHEEEECC IAVVVNPKNQVADLTMEQVAKIFSGEIKNWKEVGGKDAAINVVTREEGSGTRGAFEEIVL EEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCCCCCHHHHHHHH GEAKMDSKAITQPSTGSVKTTVAGDENAIGYISLGSLNEEVKGVKVDGVKPTVDNVKAGA CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEECCCCCCHHCCCCCE FKISRPFLYLTKGEMNEVTKAYVDFVMSEEGQKIVGESHFISIK EEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEECCCCEEEEEC >Mature Secondary Structure MFKNTKKLMLVLTLILAATVVFAGCGKKEEAPKAEGEKGAGLSGSITIAGSTSVQPLSEE CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHH LAKAFMTKNSGVTVNVQGGGSSAGVKAANEGAAQIGASSRDLKESEKGMGLTETKIALDG HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCHHEEEECC IAVVVNPKNQVADLTMEQVAKIFSGEIKNWKEVGGKDAAINVVTREEGSGTRGAFEEIVL EEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCCCCCHHHHHHHH GEAKMDSKAITQPSTGSVKTTVAGDENAIGYISLGSLNEEVKGVKVDGVKPTVDNVKAGA CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEECCCCCCHHCCCCCE FKISRPFLYLTKGEMNEVTKAYVDFVMSEEGQKIVGESHFISIK EEECCCEEEEECCCHHHHHHHHHHHHHCCCCCEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]