Click here to switch to the map view.

The map label for this gene is rpmF [H]

Identifier: 134299924

GI number: 134299924

Start: 2275113

End: 2275295

Strand: Reverse

Name: rpmF [H]

Synonym: Dred_2078

Alternate gene names: 134299924

Gene position: 2275295-2275113 (Counterclockwise)

Preceding gene: 134299925

Following gene: 134299923

Centisome position: 63.06

GC content: 51.37

Gene sequence:

>183_bases
ATGGGTGTACCGAAAAGGAAACTTGCTAAGCACCGGGGAAGACAGCGCCGGGCTATGAACATGAAATTAGAAGCCCCCAG
CCTGGTAGCCTGCCCGCAGTGCCATGCGCTAATCCAACCGCATCATCTCTGCCCTGAATGTGGTTACTACAAAAACCGTG
AAGTAATCGCTGCTAACAAGTAA

Upstream 100 bases:

>100_bases
AAAGCAGTGTGACTGCGAAAATGAAACCATTGACCCAAGATTAGCCATACTTAAAAAATTACAACAATAAGTTTTTACTT
TTTGAAGGGGGTGTAAGAAA

Downstream 100 bases:

>100_bases
TGTTAAAGCAACCCTTTCTCTAATTAGAGAAAGGGTTTTTACATTTTTTAGGAGAAATAAAAGAAATGATTTGCAATCAA
GAAGGTATCTGGTTATAATT

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MGVPKRKLAKHRGRQRRAMNMKLEAPSLVACPQCHALIQPHHLCPECGYYKNREVIAANK

Sequences:

>Translated_60_residues
MGVPKRKLAKHRGRQRRAMNMKLEAPSLVACPQCHALIQPHHLCPECGYYKNREVIAANK
>Mature_59_residues
GVPKRKLAKHRGRQRRAMNMKLEAPSLVACPQCHALIQPHHLCPECGYYKNREVIAANK

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002677
- InterPro:   IPR011332 [H]

Pfam domain/function: PF01783 Ribosomal_L32p [H]

EC number: NA

Molecular weight: Translated: 6850; Mature: 6719

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
11.7 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVPKRKLAKHRGRQRRAMNMKLEAPSLVACPQCHALIQPHHLCPECGYYKNREVIAANK
CCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
GVPKRKLAKHRGRQRRAMNMKLEAPSLVACPQCHALIQPHHLCPECGYYKNREVIAANK
CCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA