Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 134299913

GI number: 134299913

Start: 2262647

End: 2263576

Strand: Reverse

Name: ftsY [H]

Synonym: Dred_2067

Alternate gene names: 134299913

Gene position: 2263576-2262647 (Counterclockwise)

Preceding gene: 134299914

Following gene: 134299912

Centisome position: 62.74

GC content: 45.16

Gene sequence:

>930_bases
GTGGGCTTTTTTGACCGATTAAAAGAAAGCTTAACCAAAACCCGCCAAAGTTTTATTGAAAAAATTGATCAGGTGGTCAC
AGGTCGTACGGGCATTGATGAGGACCTTTATGAAGAATTGGAAGAAGTATTAATACAGGCTGATGTGGGAGTTAGTACAG
CCATGAAATTGGTTGAACGGGTGCGCAAAGGTGTAAAAGCCAGAAATGTGCAGGAAGCTTCTCGTTTAAAGGAGATTTTC
CAGGAAGAATTGGAATACCTGATGGGTGAAAAGATAACGCCCATTCAACTAAATCCCGAGGGACCCACCGTTATTATGGT
GGTGGGGGTGAATGGTGTGGGTAAAACCACCACCATTGGGAAAATGGCCCATAATTTTAAAGAGCAGGGAAAAAAAGTTC
TATTGGCAGCCGGAGATACTTTCCGGGCAGCTGCCATTGACCAACTGGAGATTTGGGCCGATCGGGTAGGGGTGGACATT
ATTAAACACCAGGAGGGTTCCGATCCCGGGGCTGTGGCCTATGATGCTGTTCATGCGGCCCGTTCCCGTAAAGCAGATAT
CCTTTTGGTTGACACCGCTGGCCGTTTGCATAATAAAAGCAACTTAATGGATGAATTGAGAAAGGTGCATAAAATTGTGG
CCCGGGAAATGCCAGGGGCGCCCCATGAGGTACTGCTCGTATTGGATGCCACCACAGGACAAAATGCACTGAATCAGGTA
AAAATATTTAGTGAGGCTGTTAATGTTACTGGCATTGCCCTCACCAAGTTAGATGGCACAGCCAAGGGTGGTGTGGTTAC
TTCTATTGTGACAGAAATGGCCATTCCCGTAAAACTCATTGGCATTGGTGAACGAATGGATGATTTACGTCCCTTTAATC
CAAAGGACTTTATTAATGCCCTTTATGGTAAAACTAAAGACAATGCATAA

Upstream 100 bases:

>100_bases
ATCTTATTTAGAGATATGGTTGACATAGCCAATTATATGGCATTATATTAGGGACAGGCTTTTACCAAAAATATTGAGGC
TGTACTGGAGGTTTACGATA

Downstream 100 bases:

>100_bases
TCATTCTAAGAAAAGAACTTTTGGTGATGGCGCCCAGAAGTTCTTTTTCTTTTTCCAGAACCAGAATAGTATGAAGAATA
AGAAATTAAGATACAAAGAA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MGFFDRLKESLTKTRQSFIEKIDQVVTGRTGIDEDLYEELEEVLIQADVGVSTAMKLVERVRKGVKARNVQEASRLKEIF
QEELEYLMGEKITPIQLNPEGPTVIMVVGVNGVGKTTTIGKMAHNFKEQGKKVLLAAGDTFRAAAIDQLEIWADRVGVDI
IKHQEGSDPGAVAYDAVHAARSRKADILLVDTAGRLHNKSNLMDELRKVHKIVAREMPGAPHEVLLVLDATTGQNALNQV
KIFSEAVNVTGIALTKLDGTAKGGVVTSIVTEMAIPVKLIGIGERMDDLRPFNPKDFINALYGKTKDNA

Sequences:

>Translated_309_residues
MGFFDRLKESLTKTRQSFIEKIDQVVTGRTGIDEDLYEELEEVLIQADVGVSTAMKLVERVRKGVKARNVQEASRLKEIF
QEELEYLMGEKITPIQLNPEGPTVIMVVGVNGVGKTTTIGKMAHNFKEQGKKVLLAAGDTFRAAAIDQLEIWADRVGVDI
IKHQEGSDPGAVAYDAVHAARSRKADILLVDTAGRLHNKSNLMDELRKVHKIVAREMPGAPHEVLLVLDATTGQNALNQV
KIFSEAVNVTGIALTKLDGTAKGGVVTSIVTEMAIPVKLIGIGERMDDLRPFNPKDFINALYGKTKDNA
>Mature_308_residues
GFFDRLKESLTKTRQSFIEKIDQVVTGRTGIDEDLYEELEEVLIQADVGVSTAMKLVERVRKGVKARNVQEASRLKEIFQ
EELEYLMGEKITPIQLNPEGPTVIMVVGVNGVGKTTTIGKMAHNFKEQGKKVLLAAGDTFRAAAIDQLEIWADRVGVDII
KHQEGSDPGAVAYDAVHAARSRKADILLVDTAGRLHNKSNLMDELRKVHKIVAREMPGAPHEVLLVLDATTGQNALNQVK
IFSEAVNVTGIALTKLDGTAKGGVVTSIVTEMAIPVKLIGIGERMDDLRPFNPKDFINALYGKTKDNA

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=272, Percent_Identity=31.6176470588235, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI226371618, Length=201, Percent_Identity=36.81592039801, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI295424842, Length=304, Percent_Identity=29.6052631578947, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI23308697, Length=304, Percent_Identity=29.6052631578947, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=35.2941176470588, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI1789874, Length=303, Percent_Identity=49.1749174917492, Blast_Score=294, Evalue=6e-81,
Organism=Escherichia coli, GI1788963, Length=310, Percent_Identity=35.8064516129032, Blast_Score=184, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17539958, Length=272, Percent_Identity=33.0882352941176, Blast_Score=147, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI193206261, Length=287, Percent_Identity=31.7073170731707, Blast_Score=112, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=271, Percent_Identity=33.9483394833948, Blast_Score=151, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6320498, Length=333, Percent_Identity=26.7267267267267, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17647949, Length=277, Percent_Identity=32.129963898917, Blast_Score=145, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24641198, Length=299, Percent_Identity=29.7658862876254, Blast_Score=105, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33840; Mature: 33708

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFDRLKESLTKTRQSFIEKIDQVVTGRTGIDEDLYEELEEVLIQADVGVSTAMKLVER
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
VRKGVKARNVQEASRLKEIFQEELEYLMGEKITPIQLNPEGPTVIMVVGVNGVGKTTTIG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCHHHH
KMAHNFKEQGKKVLLAAGDTFRAAAIDQLEIWADRVGVDIIKHQEGSDPGAVAYDAVHAA
HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHEECCCCCCCCHHHHHHHHHH
RSRKADILLVDTAGRLHNKSNLMDELRKVHKIVAREMPGAPHEVLLVLDATTGQNALNQV
HCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHH
KIFSEAVNVTGIALTKLDGTAKGGVVTSIVTEMAIPVKLIGIGERMDDLRPFNPKDFINA
HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHCCCCCHHHHHHH
LYGKTKDNA
HHCCCCCCC
>Mature Secondary Structure 
GFFDRLKESLTKTRQSFIEKIDQVVTGRTGIDEDLYEELEEVLIQADVGVSTAMKLVER
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
VRKGVKARNVQEASRLKEIFQEELEYLMGEKITPIQLNPEGPTVIMVVGVNGVGKTTTIG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCCHHHH
KMAHNFKEQGKKVLLAAGDTFRAAAIDQLEIWADRVGVDIIKHQEGSDPGAVAYDAVHAA
HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHEECCCCCCCCHHHHHHHHHH
RSRKADILLVDTAGRLHNKSNLMDELRKVHKIVAREMPGAPHEVLLVLDATTGQNALNQV
HCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHH
KIFSEAVNVTGIALTKLDGTAKGGVVTSIVTEMAIPVKLIGIGERMDDLRPFNPKDFINA
HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHCCCCCHHHHHHH
LYGKTKDNA
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]