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The map label for this gene is 134299903

Identifier: 134299903

GI number: 134299903

Start: 2252476

End: 2252829

Strand: Reverse

Name: 134299903

Synonym: Dred_2057

Alternate gene names: NA

Gene position: 2252829-2252476 (Counterclockwise)

Preceding gene: 134299906

Following gene: 134299902

Centisome position: 62.44

GC content: 36.72

Gene sequence:

>354_bases
TTGAAAGAGTTTCATAAAATTAATCTTCTAAATGACTATTATGGCAGCCTCTTAACAGAAAGACAGCAAAATTTTATTGA
ATTGTATTATGGAGAAGATTTATCACTGGGCGAAATAGCAGAACAATACAATGTGACCCGGCAGGCTGTTCATGATACAT
TAAAGAGAGCCGAGCAGACCTTAACAAACTATGAAGAAAAACTGGGACTGGTCAGTAAGTTTAGTCAGGAATCCAAGTCC
TTGGTAGAAGTAATAAATCTGCTTGATGGATACGAATCGGGTGAGGCACCCGAAGGATTGGAAAAATCCAAAGGCATACT
AAAAAAAATATTAGAAAAACGCCAGGATCTTTAA

Upstream 100 bases:

>100_bases
TATAAAATCTTTTCCCTTGACAGGGTGGAGTCTCTTCAGTAAAATAAATCTGTAAAGTGAAAGTCCTTTATACTCAAATG
GGTGAAGGGGGGACTAAACT

Downstream 100 bases:

>100_bases
ATCGTTAATCCATAAATAATATGTAAAGGAGGCGTCTGAATGTTTAAGGGCTTAGGCGAACGACTGGATGAAATTTTCAA
ATCGTTAAAGGGTAAAGGAC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKEFHKINLLNDYYGSLLTERQQNFIELYYGEDLSLGEIAEQYNVTRQAVHDTLKRAEQTLTNYEEKLGLVSKFSQESKS
LVEVINLLDGYESGEAPEGLEKSKGILKKILEKRQDL

Sequences:

>Translated_117_residues
MKEFHKINLLNDYYGSLLTERQQNFIELYYGEDLSLGEIAEQYNVTRQAVHDTLKRAEQTLTNYEEKLGLVSKFSQESKS
LVEVINLLDGYESGEAPEGLEKSKGILKKILEKRQDL
>Mature_117_residues
MKEFHKINLLNDYYGSLLTERQQNFIELYYGEDLSLGEIAEQYNVTRQAVHDTLKRAEQTLTNYEEKLGLVSKFSQESKS
LVEVINLLDGYESGEAPEGLEKSKGILKKILEKRQDL

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2057_DESRM (A4J671)

Other databases:

- EMBL:   CP000612
- RefSeq:   YP_001113399.1
- ProteinModelPortal:   A4J671
- SMR:   A4J671
- STRING:   A4J671
- GeneID:   4958558
- GenomeReviews:   CP000612_GR
- KEGG:   drm:Dred_2057
- eggNOG:   COG2739
- HOGENOM:   HBG427419
- OMA:   LDFYGQL
- ProtClustDB:   PRK00118
- BioCyc:   DRED349161:DRED_2057-MONOMER
- HAMAP:   MF_00245
- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04297 UPF0122; SSF88659 Sigma_r3_r4

EC number: NA

Molecular weight: Translated: 13516; Mature: 13516

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFHKINLLNDYYGSLLTERQQNFIELYYGEDLSLGEIAEQYNVTRQAVHDTLKRAEQT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTNYEEKLGLVSKFSQESKSLVEVINLLDGYESGEAPEGLEKSKGILKKILEKRQDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEFHKINLLNDYYGSLLTERQQNFIELYYGEDLSLGEIAEQYNVTRQAVHDTLKRAEQT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTNYEEKLGLVSKFSQESKSLVEVINLLDGYESGEAPEGLEKSKGILKKILEKRQDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA