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The map label for this gene is yqaM [H]

Identifier: 134299859

GI number: 134299859

Start: 2212100

End: 2212951

Strand: Reverse

Name: yqaM [H]

Synonym: Dred_2013

Alternate gene names: 134299859

Gene position: 2212951-2212100 (Counterclockwise)

Preceding gene: 134299860

Following gene: 134299858

Centisome position: 61.33

GC content: 36.15

Gene sequence:

>852_bases
ATGGATTACTTTAACCCTGAGAAGGTAATTAAGGATTTAAAAGCAAGGAATAAGGAAACCCCAAGCAAAGAAAAAAGGAT
AACAAAATTTGAGTGTAATAAATGCCAGGACAGGGGAATTTATATGGAGGGTGAATTTGCGGTCCCTTGCCAATGTGTTA
AAAGAAGGTCTCTGGAAAATAAATTCAAGAATTGCCAGATACCAAAATCCATGCTAAAACATTCCTTTAACAATTTTGAT
TTTAGATATTATTCTTCATCTTTAAAAGAACCTTTATCTAAAAGAACTTATTTAGAAATAGCACAAAAAACCTATCTGTT
TGCTCAGGAATTTGCCAGGGATTTTATAAAGGGAAAAGTGACGGAGGGACTATTGATTCAAGGGCCTGTGGGGTCGGGCA
AAACATTTTTGGCCTGTTGTATTGTTAATCAAGTGTTACGTAATTCTGATAAAGAGGTTTTGTTTGTAATTGTTCCAGAT
TTGTTAGAAAAAATAAAAGCCAGCTATAGTAATGCCGCTGGTGGTTATTCAGAGTATACCCTCGTGGAAGCTGCCTGTGA
AATACCCTTATTAGTTATGGACGATTTAGGTGCACATAGCTATACAGAGTGGACCAAAAATAAACTTTATAACATAATAA
ACTATCGGGTGAATCATGAATTACCGACAATCATAACCACCAATCTAATTCTGGCAGGAGATTTAACAAATTTAATAGGT
GAACGCACGGTCTCACGGATTGAACAAATGTGCCGTCCTCTATGGCTCGAACGGGAAAGGGATATCCGGGAGGTATTAAG
GGAAGAAAAAGCGGGGCAAATTAGACATTCAAGTTTTTTTGAAAAAATATAA

Upstream 100 bases:

>100_bases
GCCAGATTCTAGTCAGTTAGGGTAAAATAATATAATGAAATGATTATTCTTGATTAGTTTAATAATTGATGAAATAAGAT
CCAAAATTGGAGGGTGAAAG

Downstream 100 bases:

>100_bases
AGCTAAGAAAGATGAAGAAAAGGATAATGTACCTGTGAAAAAAAGCACTATTAGAAAATTATTCAAATCTATTGACCTTT
ACATGCTTTGCGGTATAATG

Product: AAA ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MDYFNPEKVIKDLKARNKETPSKEKRITKFECNKCQDRGIYMEGEFAVPCQCVKRRSLENKFKNCQIPKSMLKHSFNNFD
FRYYSSSLKEPLSKRTYLEIAQKTYLFAQEFARDFIKGKVTEGLLIQGPVGSGKTFLACCIVNQVLRNSDKEVLFVIVPD
LLEKIKASYSNAAGGYSEYTLVEAACEIPLLVMDDLGAHSYTEWTKNKLYNIINYRVNHELPTIITTNLILAGDLTNLIG
ERTVSRIEQMCRPLWLERERDIREVLREEKAGQIRHSSFFEKI

Sequences:

>Translated_283_residues
MDYFNPEKVIKDLKARNKETPSKEKRITKFECNKCQDRGIYMEGEFAVPCQCVKRRSLENKFKNCQIPKSMLKHSFNNFD
FRYYSSSLKEPLSKRTYLEIAQKTYLFAQEFARDFIKGKVTEGLLIQGPVGSGKTFLACCIVNQVLRNSDKEVLFVIVPD
LLEKIKASYSNAAGGYSEYTLVEAACEIPLLVMDDLGAHSYTEWTKNKLYNIINYRVNHELPTIITTNLILAGDLTNLIG
ERTVSRIEQMCRPLWLERERDIREVLREEKAGQIRHSSFFEKI
>Mature_283_residues
MDYFNPEKVIKDLKARNKETPSKEKRITKFECNKCQDRGIYMEGEFAVPCQCVKRRSLENKFKNCQIPKSMLKHSFNNFD
FRYYSSSLKEPLSKRTYLEIAQKTYLFAQEFARDFIKGKVTEGLLIQGPVGSGKTFLACCIVNQVLRNSDKEVLFVIVPD
LLEKIKASYSNAAGGYSEYTLVEAACEIPLLVMDDLGAHSYTEWTKNKLYNIINYRVNHELPTIITTNLILAGDLTNLIG
ERTVSRIEQMCRPLWLERERDIREVLREEKAGQIRHSSFFEKI

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqxC and T.hyodysenteriae hemolysin tlyA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 32810; Mature: 32810

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYFNPEKVIKDLKARNKETPSKEKRITKFECNKCQDRGIYMEGEFAVPCQCVKRRSLEN
CCCCCHHHHHHHHHHCCCCCCCHHHHCHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHH
KFKNCQIPKSMLKHSFNNFDFRYYSSSLKEPLSKRTYLEIAQKTYLFAQEFARDFIKGKV
HHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TEGLLIQGPVGSGKTFLACCIVNQVLRNSDKEVLFVIVPDLLEKIKASYSNAAGGYSEYT
CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCHHHH
LVEAACEIPLLVMDDLGAHSYTEWTKNKLYNIINYRVNHELPTIITTNLILAGDLTNLIG
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ERTVSRIEQMCRPLWLERERDIREVLREEKAGQIRHSSFFEKI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MDYFNPEKVIKDLKARNKETPSKEKRITKFECNKCQDRGIYMEGEFAVPCQCVKRRSLEN
CCCCCHHHHHHHHHHCCCCCCCHHHHCHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHH
KFKNCQIPKSMLKHSFNNFDFRYYSSSLKEPLSKRTYLEIAQKTYLFAQEFARDFIKGKV
HHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TEGLLIQGPVGSGKTFLACCIVNQVLRNSDKEVLFVIVPDLLEKIKASYSNAAGGYSEYT
CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCHHHH
LVEAACEIPLLVMDDLGAHSYTEWTKNKLYNIINYRVNHELPTIITTNLILAGDLTNLIG
HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ERTVSRIEQMCRPLWLERERDIREVLREEKAGQIRHSSFFEKI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]