| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is cobP [H]
Identifier: 134299760
GI number: 134299760
Start: 2100411
End: 2100968
Strand: Reverse
Name: cobP [H]
Synonym: Dred_1910
Alternate gene names: 134299760
Gene position: 2100968-2100411 (Counterclockwise)
Preceding gene: 134299762
Following gene: 134299758
Centisome position: 58.23
GC content: 42.29
Gene sequence:
>558_bases TTGAAAGAGAACAAACTTATTTTGGTTTTGGGAGGAACCCGAAGCGGTAAAAGTCAGTATGCTGAAAAAATAGCTAAGAT ACAGGGACAAAGGGTTCTTTACCTGGCCACAGCAACCGTTAATGATAATGAAATGAAGAGGCGTGTAAGGTTACACCAGG AAAGAAGGCCCGATGCCTGGGACACCCGGGAGGAACCCATAAAGGTAACGCAGGTCATAAATGAATTGGGGGACAGTTAT GATGTAATATTACTGGACTGTCTCACTCTTTGGATAACCAATCTTTTGTTAGAAAACCAGAATATTAATGAAGCCCATTT AGCTGAAAAAGAAAAACAAATTTTGCAGGAAGCCAGTGAGCTGGCGCTTGTTTGTTCAAAGACTAATGCAACAGTCATAG TTGTAAGCAATGAGGTAGGTTTGAGTATTGTGCCGGAGTATCCTTTGGGGCGGGTATTTAGGGATATAAGTGGCCTAGCC AATCAGATCTTTGCCCAAAGGGCCAGTGAGGTTTATTTTGTGGCTGCAGGACTACCCCTTTCATTAAAAGGTAATTAG
Upstream 100 bases:
>100_bases TTATATTGAATAGCAGGATTTTAGAGACTTTGGCAAGAACCATAATCATATCCATGATAATGAATTAAAGAAAAGAAAGC AATGGAAAAGGAGAGCGGTC
Downstream 100 bases:
>100_bases GACTATGACTAAGCCCAGCGGTGATATGTCAAGAGAATGATTCTAAAAAATTGGAAATTAATTTAACAAAAGTGTACCCT ATACCCTAAAAAAGGGTATA
Product: adenosylcobinamide-phosphate guanylyltransferase
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKENKLILVLGGTRSGKSQYAEKIAKIQGQRVLYLATATVNDNEMKRRVRLHQERRPDAWDTREEPIKVTQVINELGDSY DVILLDCLTLWITNLLLENQNINEAHLAEKEKQILQEASELALVCSKTNATVIVVSNEVGLSIVPEYPLGRVFRDISGLA NQIFAQRASEVYFVAAGLPLSLKGN
Sequences:
>Translated_185_residues MKENKLILVLGGTRSGKSQYAEKIAKIQGQRVLYLATATVNDNEMKRRVRLHQERRPDAWDTREEPIKVTQVINELGDSY DVILLDCLTLWITNLLLENQNINEAHLAEKEKQILQEASELALVCSKTNATVIVVSNEVGLSIVPEYPLGRVFRDISGLA NQIFAQRASEVYFVAAGLPLSLKGN >Mature_185_residues MKENKLILVLGGTRSGKSQYAEKIAKIQGQRVLYLATATVNDNEMKRRVRLHQERRPDAWDTREEPIKVTQVINELGDSY DVILLDCLTLWITNLLLENQNINEAHLAEKEKQILQEASELALVCSKTNATVIVVSNEVGLSIVPEYPLGRVFRDISGLA NQIFAQRASEVYFVAAGLPLSLKGN
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=181, Percent_Identity=39.2265193370166, Blast_Score=128, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 20717; Mature: 20717
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENKLILVLGGTRSGKSQYAEKIAKIQGQRVLYLATATVNDNEMKRRVRLHQERRPDAW CCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCC DTREEPIKVTQVINELGDSYDVILLDCLTLWITNLLLENQNINEAHLAEKEKQILQEASE CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LALVCSKTNATVIVVSNEVGLSIVPEYPLGRVFRDISGLANQIFAQRASEVYFVAAGLPL HEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEE SLKGN EECCC >Mature Secondary Structure MKENKLILVLGGTRSGKSQYAEKIAKIQGQRVLYLATATVNDNEMKRRVRLHQERRPDAW CCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCCC DTREEPIKVTQVINELGDSYDVILLDCLTLWITNLLLENQNINEAHLAEKEKQILQEASE CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LALVCSKTNATVIVVSNEVGLSIVPEYPLGRVFRDISGLANQIFAQRASEVYFVAAGLPL HEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEE SLKGN EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1655696 [H]