| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is yghO [H]
Identifier: 134299703
GI number: 134299703
Start: 2030133
End: 2031212
Strand: Reverse
Name: yghO [H]
Synonym: Dred_1850
Alternate gene names: 134299703
Gene position: 2031212-2030133 (Counterclockwise)
Preceding gene: 134299704
Following gene: 134299700
Centisome position: 56.3
GC content: 41.67
Gene sequence:
>1080_bases TTGTTAAAAATTATCAAAGTTAAGGAACCTGGCCATTGGCAAAAATTCTTGGAATTACCCTGGCTAATATATCGCAAGGA TCCACTTTGGACCCCCTGGGCGGACCATGGCAGAATGTTTGACCCTCAGTCTAATCCTATCTTGCGTCACGTTCGGTATG AGTGTTTTTTGGCCTTAGATAATGATAAGCCTGTTGGCCGTATCGCGGCAATTACAGATGATCTTTTGGCAGATAAAAGG GTGGGCTTGTTTGGTTGTTTCGAGTCTATTGATAGTTCCGAGGTAGCAGGGGAGTTAATAAAAGCAGCTAGCCAAAGTCT ATCTGATAGGGGAAAAAATATAATTCAGGGTCCGGCAACGTTAAATACTTCACAGCAGGTCGGGTTTTTGGTAGAGGGGT TTGAAAAACCTCCCTTATTTATGATGCCGTATAATCCACCATATTATATAAGACTCATGGAGGAAAATGGATTTTATTCA ATATTAGGACTTTACTCTTACTCTTATTCCTATTCTACAAAAATAGATGCTAAACTGGCCTCTGTAGCCAAAAGGGCAGC CAGGATTCCCAATATAAGGATACGTCCTGTTAATTTAAATAATCCCTGGAGAGAAGGGGAAAAATTAGCAGCTATTCATA ACGAAACCATGACCAATCAGTGGGGATTTGTTCCCATGGACCAGGAAGAAGCAGCAAGCTTTATAGCCGGTCTCAGGGGT AATACTGACCCTGAGCTATTAATCTTTTGTGAGGTTGACAACAAGCCTGTAGGAGTATGCTTAATGATGCCTGATGCAGG GCCTAGGATACGTGCAGCCAGACGTTCAGGTTTCAATCTTCCTTTTACAAGGAGTAAACTCTTACGTGTTGGGGTTTTGG GAGTTAGTCCGGAATACAGGCGCCGTGGAGTAGTGGCTTTATTAATAGACAGAGCAAGAAGAACCATGCTGAGAAAGGGC TATCAACAGGCTGAGTTATCTCTGATTATGGATACAAATAAAGATATGAACAGAATTATTACTTCAGCCGTGGGAGGCCA AGTAAGTAAAAGATATCGGGTTTATCAAAAGGATTTATAA
Upstream 100 bases:
>100_bases ATAATTTAGGGACGGTTATTGGAATTCCTCAAGGGGTTATCTGCACAATACTGCAGGGTGATACATAAAATGAAGCAACT AGAATTTTGGAGGTATCATT
Downstream 100 bases:
>100_bases TTTTCGAGGGATTTCAGTCCAAACGGTGCTTTTATTACCGATTCTGCTTTGAGGGGCACTTTAATCAAATGAATAGGTTT CTTAAAGCCTGATAACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALDNDKPVGRIAAITDDLLADKR VGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPATLNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYS ILGLYSYSYSYSTKIDAKLASVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYRRRGVVALLIDRARRTMLRKG YQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL
Sequences:
>Translated_359_residues MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALDNDKPVGRIAAITDDLLADKR VGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPATLNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYS ILGLYSYSYSYSTKIDAKLASVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYRRRGVVALLIDRARRTMLRKG YQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL >Mature_359_residues MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALDNDKPVGRIAAITDDLLADKR VGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPATLNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYS ILGLYSYSYSYSTKIDAKLASVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYRRRGVVALLIDRARRTMLRKG YQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40804; Mature: 40804
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALD CEEEEEECCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCCHHHHEEEEEEEEEEC NDKPVGRIAAITDDLLADKRVGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPAT CCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC LNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYSILGLYSYSYSYSTKIDAKLA CCCCHHCCHHEECCCCCCEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECCCHHHHHH SVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG HHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYR CCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHEEEEEECCCHHHH RRGVVALLIDRARRTMLRKGYQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL HCCEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALD CEEEEEECCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCCHHHHEEEEEEEEEEC NDKPVGRIAAITDDLLADKRVGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPAT CCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC LNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYSILGLYSYSYSYSTKIDAKLA CCCCHHCCHHEECCCCCCEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECCCHHHHHH SVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG HHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYR CCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHEEEEEECCCHHHH RRGVVALLIDRARRTMLRKGYQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL HCCEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]