| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299667
Identifier: 134299667
GI number: 134299667
Start: 1986749
End: 1987213
Strand: Reverse
Name: 134299667
Synonym: Dred_1813
Alternate gene names: NA
Gene position: 1987213-1986749 (Counterclockwise)
Preceding gene: 134299678
Following gene: 134299664
Centisome position: 55.08
GC content: 37.63
Gene sequence:
>465_bases ATGACTCCCATTCATGAGTACTCCACTGTTCATCAAAATGCCACTGTTAAAGAAGCGATTGATTCCTTGAAAAAATCCTT CTTTTTAGATGAACAAGGAAATGTCCATGGCCATGCCTCGCTCTTGGTGGTGAATCAAAACAAAGAATTGGTAGGTATTT TAACCTTAAAATCCATATTAGAGGCCCTGGTTCTAGTTAAGAAGGAGAACGAAAACGTGTTCAACTCCTATTATTGGCTT TATTTTCTGGATGAAACCTATAAATCAGCTGCAGGAATTCCTGTAAAGAAGATAATGAGGAGCAGAAGATTGGTTTCTGT TAAAACAGATAATGACATTATGAGTGCGGTGGAGTTAATGGTTAAGCATAAAGTAAACTCGATCCCTGTTATTAATGGGG CAGGAAGGTTGGTGGGTATACTTCGCAGCAAAGATGTTTTTGGTATGATTAACGAACTCTTATAA
Upstream 100 bases:
>100_bases TCACCTTTTAATTAAGCATAAATCTATATAAATGTATAAGGTTTATAAAGTTTTGCCAAAGGGGTTGGTAAGTCTGAAGA AAATACCAGTACGGGAAGTT
Downstream 100 bases:
>100_bases AGGGGGTAACCCGGAGTAAAAAAGCACACAATCTCTGGTTTAAGAGTGTGTGCCAAATAAAGCTAGACGATTTTAGTTGT CCAATCCTCAAGGTTCCATA
Product: CBS domain-containing protein
Products: NA
Alternate protein names: Signal Transduction Protein With CBS Domains
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTPIHEYSTVHQNATVKEAIDSLKKSFFLDEQGNVHGHASLLVVNQNKELVGILTLKSILEALVLVKKENENVFNSYYWL YFLDETYKSAAGIPVKKIMRSRRLVSVKTDNDIMSAVELMVKHKVNSIPVINGAGRLVGILRSKDVFGMINELL
Sequences:
>Translated_154_residues MTPIHEYSTVHQNATVKEAIDSLKKSFFLDEQGNVHGHASLLVVNQNKELVGILTLKSILEALVLVKKENENVFNSYYWL YFLDETYKSAAGIPVKKIMRSRRLVSVKTDNDIMSAVELMVKHKVNSIPVINGAGRLVGILRSKDVFGMINELL >Mature_153_residues TPIHEYSTVHQNATVKEAIDSLKKSFFLDEQGNVHGHASLLVVNQNKELVGILTLKSILEALVLVKKENENVFNSYYWLY FLDETYKSAAGIPVKKIMRSRRLVSVKTDNDIMSAVELMVKHKVNSIPVINGAGRLVGILRSKDVFGMINELL
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17328; Mature: 17197
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIHEYSTVHQNATVKEAIDSLKKSFFLDEQGNVHGHASLLVVNQNKELVGILTLKSIL CCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEHHHHHHHHH EALVLVKKENENVFNSYYWLYFLDETYKSAAGIPVKKIMRSRRLVSVKTDNDIMSAVELM HHHHHHHCCCCCCHHEEEEEEEEECHHHHCCCCCHHHHHHHCCEEEEECCHHHHHHHHHH VKHKVNSIPVINGAGRLVGILRSKDVFGMINELL HHHCCCCCCEECCCCCEEHHHHCCHHHHHHHHCC >Mature Secondary Structure TPIHEYSTVHQNATVKEAIDSLKKSFFLDEQGNVHGHASLLVVNQNKELVGILTLKSIL CCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEHHHHHHHHH EALVLVKKENENVFNSYYWLYFLDETYKSAAGIPVKKIMRSRRLVSVKTDNDIMSAVELM HHHHHHHCCCCCCHHEEEEEEEEECHHHHCCCCCHHHHHHHCCEEEEECCHHHHHHHHHH VKHKVNSIPVINGAGRLVGILRSKDVFGMINELL HHHCCCCCCEECCCCCEEHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA